1q2v

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{{Seed}}
 
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[[Image:1q2v.png|left|200px]]
 
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==Crystal structure of the chaperonin from Thermococcus strain KS-1 (nucleotide-free form)==
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The line below this paragraph, containing "STRUCTURE_1q2v", creates the "Structure Box" on the page.
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<StructureSection load='1q2v' size='340' side='right'caption='[[1q2v]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1q2v]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_sp._JCM_11816 Thermococcus sp. JCM 11816]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q2V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q2V FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_1q2v| PDB=1q2v | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q2v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q2v OCA], [https://pdbe.org/1q2v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q2v RCSB], [https://www.ebi.ac.uk/pdbsum/1q2v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q2v ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/THSA_THEK1 THSA_THEK1] Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q2/1q2v_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q2v ConSurf].
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<div style="clear:both"></div>
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===Crystal structure of the chaperonin from Thermococcus strain KS-1 (nucleotide-free form)===
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==See Also==
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*[[Chaperonin 3D structures|Chaperonin 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_14729342}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 14729342 is the PubMed ID number.
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[[Category: Thermococcus sp. JCM 11816]]
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[[Category: Iizuka R]]
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{{ABSTRACT_PUBMED_14729342}}
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[[Category: Maruyama T]]
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[[Category: Miki K]]
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==About this Structure==
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[[Category: Shomura Y]]
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1Q2V is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermococcus_sp. Thermococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q2V OCA].
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[[Category: Yohda M]]
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[[Category: Yoshida T]]
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==Reference==
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Crystal structures of the group II chaperonin from Thermococcus strain KS-1: steric hindrance by the substituted amino acid, and inter-subunit rearrangement between two crystal forms., Shomura Y, Yoshida T, Iizuka R, Maruyama T, Yohda M, Miki K, J Mol Biol. 2004 Jan 30;335(5):1265-78. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14729342 14729342]
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[[Category: Chaperonin ATPase]]
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[[Category: Single protein]]
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[[Category: Thermococcus sp.]]
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[[Category: Iizuka, R.]]
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[[Category: Maruyama, T.]]
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[[Category: Miki, K.]]
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[[Category: Shomura, Y.]]
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[[Category: Yohda, M.]]
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[[Category: Yoshida, T.]]
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[[Category: Closed state]]
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[[Category: Hexadecamer]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 10:08:14 2008''
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Current revision

Crystal structure of the chaperonin from Thermococcus strain KS-1 (nucleotide-free form)

PDB ID 1q2v

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