1pux

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(New page: 200px<br /><applet load="1pux" size="450" color="white" frame="true" align="right" spinBox="true" caption="1pux" /> '''NMR Solution Structure of BeF3-Activated Spo...)
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[[Image:1pux.gif|left|200px]]<br /><applet load="1pux" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1pux" />
 
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'''NMR Solution Structure of BeF3-Activated Spo0F, 20 conformers'''<br />
 
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==Overview==
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==NMR Solution Structure of BeF3-Activated Spo0F, 20 conformers==
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Two-component systems, which are comprised of a single histidine-aspartate, phosphotransfer module, are the dominant signaling pathways in bacteria, and have recently been identified in several eukaryotic organisms as well., A tandem connection of two or more histidine-aspartate motifs forms, complex phosphorelays. While response regulators from simple two-component, systems have been characterized structurally in their inactive and active, forms, we address here the question of whether a response regulator from a, phosphorelay has a distinct structural basis of activation. We report the, NMR solution structure of BeF(3)(-)-activated Spo0F, the first structure, of a response regulator from a phosphorelay in its activated state., Conformational changes were found in regions previously identified to, change in simple two-component systems. In addition, a downward shift by, half a helical turn in helix 1, located on the opposite side of the common, activation surface, was observed as a consequence of BeF(3)(-) activation., Conformational changes in helix 1 can be rationalized by the distinct, function of phosphoryl transfer to the second histidine kinase, Spo0B, because helix 1 is known to interact directly with Spo0B and the, phosphatase RapB. The identification of structural rearrangements in Spo0F, supports the hypothesis of a pre-existing equilibrium between the inactive, and active state prior to phosphorylation that was suggested on the basis, of previous NMR dynamics studies on Spo0F. A shift of a pre-existing, equilibrium is likely a general feature of response regulators.
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<StructureSection load='1pux' size='340' side='right'caption='[[1pux]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1pux]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PUX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PUX FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pux FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pux OCA], [https://pdbe.org/1pux PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pux RCSB], [https://www.ebi.ac.uk/pdbsum/1pux PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pux ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SP0F_BACSU SP0F_BACSU] Key element in the phosphorelay regulating sporulation initiation. Phosphorylation of spo0B during sporulation initiation.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pu/1pux_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pux ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Two-component systems, which are comprised of a single histidine-aspartate phosphotransfer module, are the dominant signaling pathways in bacteria and have recently been identified in several eukaryotic organisms as well. A tandem connection of two or more histidine-aspartate motifs forms complex phosphorelays. While response regulators from simple two-component systems have been characterized structurally in their inactive and active forms, we address here the question of whether a response regulator from a phosphorelay has a distinct structural basis of activation. We report the NMR solution structure of BeF(3)(-)-activated Spo0F, the first structure of a response regulator from a phosphorelay in its activated state. Conformational changes were found in regions previously identified to change in simple two-component systems. In addition, a downward shift by half a helical turn in helix 1, located on the opposite side of the common activation surface, was observed as a consequence of BeF(3)(-) activation. Conformational changes in helix 1 can be rationalized by the distinct function of phosphoryl transfer to the second histidine kinase, Spo0B, because helix 1 is known to interact directly with Spo0B and the phosphatase RapB. The identification of structural rearrangements in Spo0F supports the hypothesis of a pre-existing equilibrium between the inactive and active state prior to phosphorylation that was suggested on the basis of previous NMR dynamics studies on Spo0F. A shift of a pre-existing equilibrium is likely a general feature of response regulators.
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==About this Structure==
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The NMR solution structure of BeF(3)(-)-activated Spo0F reveals the conformational switch in a phosphorelay system.,Gardino AK, Volkman BF, Cho HS, Lee SY, Wemmer DE, Kern D J Mol Biol. 2003 Aug 1;331(1):245-54. PMID:12875849<ref>PMID:12875849</ref>
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1PUX is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1PUX OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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The NMR solution structure of BeF(3)(-)-activated Spo0F reveals the conformational switch in a phosphorelay system., Gardino AK, Volkman BF, Cho HS, Lee SY, Wemmer DE, Kern D, J Mol Biol. 2003 Aug 1;331(1):245-54. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=12875849 12875849]
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</div>
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[[Category: Bacillus subtilis]]
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<div class="pdbe-citations 1pux" style="background-color:#fffaf0;"></div>
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[[Category: Single protein]]
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[[Category: Cho, H.S.]]
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[[Category: Gardino, A.K.]]
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[[Category: Kern, D.]]
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[[Category: Lee, S.Y.]]
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[[Category: Volkman, B.F.]]
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[[Category: Wemmer, D.E.]]
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[[Category: (beta/alpha)5 barrel]]
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[[Category: beryllofluoride]]
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[[Category: phosphorelay]]
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[[Category: response regulator]]
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[[Category: sporulation]]
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[[Category: two-component systems]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 00:08:29 2007''
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==See Also==
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*[[Phosphotransferase 3D structures|Phosphotransferase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Bacillus subtilis]]
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[[Category: Large Structures]]
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[[Category: Cho HS]]
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[[Category: Gardino AK]]
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[[Category: Kern D]]
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[[Category: Lee SY]]
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[[Category: Volkman BF]]
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[[Category: Wemmer DE]]

Current revision

NMR Solution Structure of BeF3-Activated Spo0F, 20 conformers

PDB ID 1pux

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