1pvj

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(New page: 200px<br /><applet load="1pvj" size="450" color="white" frame="true" align="right" spinBox="true" caption="1pvj, resolution 3.0&Aring;" /> '''Crystal structure of ...)
Current revision (22:11, 26 March 2025) (edit) (undo)
 
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[[Image:1pvj.jpg|left|200px]]<br /><applet load="1pvj" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1pvj, resolution 3.0&Aring;" />
 
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'''Crystal structure of the Streptococcal pyrogenic exotoxin B (SpeB)- inhibitor complex'''<br />
 
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==About this Structure==
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==Crystal structure of the Streptococcal pyrogenic exotoxin B (SpeB)- inhibitor complex==
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1PVJ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes Streptococcus pyogenes] with ZFB as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1PVJ OCA].
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<StructureSection load='1pvj' size='340' side='right'caption='[[1pvj]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
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[[Category: Single protein]]
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== Structural highlights ==
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[[Category: Streptococcus pyogenes]]
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<table><tr><td colspan='2'>[[1pvj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes Streptococcus pyogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PVJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PVJ FirstGlance]. <br>
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[[Category: Cygler, M.]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
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[[Category: Doran, J.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZFB:(3R)-3-{[(BENZYLOXY)CARBONYL]AMINO}-2-OXO-4-PHENYLBUTANE-1-DIAZONIUM'>ZFB</scene></td></tr>
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[[Category: Menard, R.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pvj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pvj OCA], [https://pdbe.org/1pvj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pvj RCSB], [https://www.ebi.ac.uk/pdbsum/1pvj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pvj ProSAT]</span></td></tr>
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[[Category: Sivaraman, J.]]
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</table>
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[[Category: Ziomek, E.]]
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== Function ==
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[[Category: ZFB]]
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[https://www.uniprot.org/uniprot/SPEB_STRPY SPEB_STRPY] Important streptococcal virulence factor which cleaves human fibronectin and degrades vitronectin. Also cleaves human IL1B precursor to form biologically active IL1B. Can induce apoptosis in human monocytes and epithelial cells in vitro, and reduces phagocytic activity in monocytic cells. Thus, may play a role in bacterial colonization, invasion, and inhibition of wound healing.<ref>PMID:9864206</ref>
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[[Category: crystal structure]]
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== Evolutionary Conservation ==
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[[Category: streptococcus pyogenes exotoxin(speb)]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: z-f-ch2n2- benzyloxycarbonyl phenylalanyl alanyl diazomethane.]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pv/1pvj_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pvj ConSurf].
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<div style="clear:both"></div>
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 00:09:35 2007''
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==See Also==
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*[[Exotoxin 3D structures|Exotoxin 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Streptococcus pyogenes]]
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[[Category: Cygler M]]
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[[Category: Doran J]]
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[[Category: Menard R]]
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[[Category: Sivaraman J]]
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[[Category: Ziomek E]]

Current revision

Crystal structure of the Streptococcal pyrogenic exotoxin B (SpeB)- inhibitor complex

PDB ID 1pvj

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