2g3h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:26, 14 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2g3h.png|left|200px]]
 
-
<!--
+
==Cyanide Binding and Heme Cavity Conformational Transitions in Drosophila melanogaster Hexa-coordinate Hemoglobin==
-
The line below this paragraph, containing "STRUCTURE_2g3h", creates the "Structure Box" on the page.
+
<StructureSection load='2g3h' size='340' side='right'caption='[[2g3h]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2g3h]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G3H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G3H FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_2g3h| PDB=2g3h | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g3h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g3h OCA], [https://pdbe.org/2g3h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g3h RCSB], [https://www.ebi.ac.uk/pdbsum/2g3h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g3h ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9VF15_DROME Q9VF15_DROME]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g3/2g3h_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g3h ConSurf].
 +
<div style="clear:both"></div>
-
===Cyanide Binding and Heme Cavity Conformational Transitions in Drosophila melanogaster Hexa-coordinate Hemoglobin===
+
==See Also==
-
 
+
*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16906763}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 16906763 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_16906763}}
+
-
 
+
-
==About this Structure==
+
-
2G3H is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G3H OCA].
+
-
 
+
-
==Reference==
+
-
Cyanide binding and heme cavity conformational transitions in Drosophila melanogaster hexacoordinate hemoglobin., de Sanctis D, Ascenzi P, Bocedi A, Dewilde S, Burmester T, Hankeln T, Moens L, Bolognesi M, Biochemistry. 2006 Aug 22;45(33):10054-61. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16906763 16906763]
+
[[Category: Drosophila melanogaster]]
[[Category: Drosophila melanogaster]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Ascenzi, P.]]
+
[[Category: Ascenzi P]]
-
[[Category: Bocedi, A.]]
+
[[Category: Bocedi A]]
-
[[Category: Bolognesi, M.]]
+
[[Category: Bolognesi M]]
-
[[Category: Burmester, T.]]
+
[[Category: Burmester T]]
-
[[Category: Dewilde, S.]]
+
[[Category: Dewilde S]]
-
[[Category: Hankeln, T.]]
+
[[Category: Hankeln T]]
-
[[Category: Moens, L.]]
+
[[Category: Moens L]]
-
[[Category: Sanctis, D de.]]
+
[[Category: De Sanctis D]]
-
[[Category: Cyanide binding to hemoglobin]]
+
-
[[Category: Drosophila melanogaster hemoglobin structure]]
+
-
[[Category: Fruit fly hemoglobin]]
+
-
[[Category: Heme distal site structure]]
+
-
[[Category: Hexa-coordinate hemoglobin]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 12:15:55 2008''
+

Current revision

Cyanide Binding and Heme Cavity Conformational Transitions in Drosophila melanogaster Hexa-coordinate Hemoglobin

PDB ID 2g3h

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2g3h"
Personal tools