2b4q

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:16, 14 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2b4q.png|left|200px]]
 
-
<!--
+
==Pseudomonas aeruginosa RhlG/NADP active-site complex==
-
The line below this paragraph, containing "STRUCTURE_2b4q", creates the "Structure Box" on the page.
+
<StructureSection load='2b4q' size='340' side='right'caption='[[2b4q]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2b4q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B4Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B4Q FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
-
{{STRUCTURE_2b4q| PDB=2b4q | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b4q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b4q OCA], [https://pdbe.org/2b4q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b4q RCSB], [https://www.ebi.ac.uk/pdbsum/2b4q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b4q ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RHLG_PSEAE RHLG_PSEAE] Required for the synthesis of the beta-hydroxy acid moiety of rhamnolipids.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b4/2b4q_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2b4q ConSurf].
 +
<div style="clear:both"></div>
-
===Pseudomonas aeruginosa RhlG/NADP active-site complex===
+
==See Also==
-
 
+
*[[Beta-ketoacyl carrier protein reductase 3D structures|Beta-ketoacyl carrier protein reductase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16624803}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 16624803 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_16624803}}
+
-
 
+
-
==About this Structure==
+
-
2B4Q is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B4Q OCA].
+
-
 
+
-
==Reference==
+
-
Structure of RhlG, an essential beta-ketoacyl reductase in the rhamnolipid biosynthetic pathway of Pseudomonas aeruginosa., Miller DJ, Zhang YM, Rock CO, White SW, J Biol Chem. 2006 Jun 30;281(26):18025-32. Epub 2006 Apr 18. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16624803 16624803]
+
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Single protein]]
+
[[Category: Miller DJ]]
-
[[Category: Miller, D J.]]
+
[[Category: White SW]]
-
[[Category: White, S W.]]
+
-
[[Category: Pseudomonas aeruginosa]]
+
-
[[Category: Rhlg-nadp complex]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 12:48:10 2008''
+

Current revision

Pseudomonas aeruginosa RhlG/NADP active-site complex

PDB ID 2b4q

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2b4q"
Personal tools