1q8w

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(New page: 200px<br /><applet load="1q8w" size="450" color="white" frame="true" align="right" spinBox="true" caption="1q8w, resolution 2.20&Aring;" /> '''The Catalytic Subuni...)
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[[Image:1q8w.jpg|left|200px]]<br /><applet load="1q8w" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1q8w, resolution 2.20&Aring;" />
 
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'''The Catalytic Subunit of cAMP-dependent Protein Kinase in Complex with Rho-kinase Inhibitor Fasudil (HA-1077)'''<br />
 
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==Overview==
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==The Catalytic Subunit of cAMP-dependent Protein Kinase in Complex with Rho-kinase Inhibitor Fasudil (HA-1077)==
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Protein kinases require strict inactivation to prevent spurious cellular, signaling; overactivity can cause cancer or other diseases and, necessitates selective inhibition for therapy. Rho-kinase is involved in, such processes as tumor invasion, cell adhesion, smooth muscle, contraction, and formation of focal adhesion fibers, as revealed using, inhibitor Y-27632. Another Rho-kinase inhibitor, HA-1077 or Fasudil, is, currently used in the treatment of cerebral vasospasm; the related, nanomolar inhibitor H-1152P improves on its selectivity and potency. We, have determined the crystal structures of HA-1077, H-1152P, and Y-27632 in, complexes with protein kinase A (PKA) as a surrogate kinase to analyze, Rho-kinase inhibitor binding properties. Features conserved between PKA, and Rho-kinase are involved in the key binding interactions, while a, combination of residues at the ATP binding pocket that are unique to, Rho-kinase may explain the inhibitors' Rho-kinase selectivity. Further, a, second H-1152P binding site potentially points toward PKA regulatory, domain interaction modulators.
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<StructureSection load='1q8w' size='340' side='right'caption='[[1q8w]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1q8w]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q8W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q8W FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=M77:5-(1,4-DIAZEPAN-1-SULFONYL)ISOQUINOLINE'>M77</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene>, <scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q8w OCA], [https://pdbe.org/1q8w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q8w RCSB], [https://www.ebi.ac.uk/pdbsum/1q8w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q8w ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q8/1q8w_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q8w ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Protein kinases require strict inactivation to prevent spurious cellular signaling; overactivity can cause cancer or other diseases and necessitates selective inhibition for therapy. Rho-kinase is involved in such processes as tumor invasion, cell adhesion, smooth muscle contraction, and formation of focal adhesion fibers, as revealed using inhibitor Y-27632. Another Rho-kinase inhibitor, HA-1077 or Fasudil, is currently used in the treatment of cerebral vasospasm; the related nanomolar inhibitor H-1152P improves on its selectivity and potency. We have determined the crystal structures of HA-1077, H-1152P, and Y-27632 in complexes with protein kinase A (PKA) as a surrogate kinase to analyze Rho-kinase inhibitor binding properties. Features conserved between PKA and Rho-kinase are involved in the key binding interactions, while a combination of residues at the ATP binding pocket that are unique to Rho-kinase may explain the inhibitors' Rho-kinase selectivity. Further, a second H-1152P binding site potentially points toward PKA regulatory domain interaction modulators.
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==About this Structure==
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Protein kinase A in complex with Rho-kinase inhibitors Y-27632, Fasudil, and H-1152P: structural basis of selectivity.,Breitenlechner C, Gassel M, Hidaka H, Kinzel V, Huber R, Engh RA, Bossemeyer D Structure. 2003 Dec;11(12):1595-607. PMID:14656443<ref>PMID:14656443</ref>
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1Q8W is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] with M77 as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1Q8W OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Protein kinase A in complex with Rho-kinase inhibitors Y-27632, Fasudil, and H-1152P: structural basis of selectivity., Breitenlechner C, Gassel M, Hidaka H, Kinzel V, Huber R, Engh RA, Bossemeyer D, Structure. 2003 Dec;11(12):1595-607. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=14656443 14656443]
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</div>
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[[Category: Bos taurus]]
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<div class="pdbe-citations 1q8w" style="background-color:#fffaf0;"></div>
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[[Category: Non-specific serine/threonine protein kinase]]
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[[Category: Protein complex]]
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[[Category: Bossemeyer, D.]]
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[[Category: Breitenlechner, C.]]
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[[Category: Engh, R.A.]]
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[[Category: Gassel, M.]]
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[[Category: Hidaka, H.]]
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[[Category: Huber, R.]]
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[[Category: Kinzel, V.]]
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[[Category: M77]]
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[[Category: atp-binding]]
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[[Category: camp]]
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[[Category: kinase-inhibitor-complex]]
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[[Category: phosphorylation]]
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[[Category: phosphotransferase/inhibitor]]
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[[Category: pka]]
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[[Category: rho-kinase]]
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[[Category: serine/threonine-protein kinase]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 00:29:38 2007''
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==See Also==
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*[[CAMP-dependent protein kinase 3D structures|CAMP-dependent protein kinase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Bos taurus]]
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Bossemeyer D]]
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[[Category: Breitenlechner C]]
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[[Category: Engh RA]]
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[[Category: Gassel M]]
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[[Category: Hidaka H]]
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[[Category: Huber R]]
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[[Category: Kinzel V]]

Current revision

The Catalytic Subunit of cAMP-dependent Protein Kinase in Complex with Rho-kinase Inhibitor Fasudil (HA-1077)

PDB ID 1q8w

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