2pel

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{{Seed}}
 
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[[Image:2pel.png|left|200px]]
 
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==PEANUT LECTIN==
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The line below this paragraph, containing "STRUCTURE_2pel", creates the "Structure Box" on the page.
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<StructureSection load='2pel' size='340' side='right'caption='[[2pel]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2pel]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1pel 1pel]. The April 2010 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Concanavalin A and Circular Permutation'' by David Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2010_4 10.2210/rcsb_pdb/mom_2010_4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PEL FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PRD_900004:beta-lactose'>PRD_900004</scene>, <scene name='pdbligand=PRD_900008:alpha-lactose'>PRD_900008</scene></td></tr>
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{{STRUCTURE_2pel| PDB=2pel | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pel FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pel OCA], [https://pdbe.org/2pel PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pel RCSB], [https://www.ebi.ac.uk/pdbsum/2pel PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pel ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/LECG_ARAHY LECG_ARAHY] D-galactose specific lectin.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pe/2pel_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pel ConSurf].
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<div style="clear:both"></div>
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===PEANUT LECTIN===
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==See Also==
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*[[Agglutinin 3D structures|Agglutinin 3D structures]]
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*[[Galactose-binding lectin|Galactose-binding lectin]]
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__TOC__
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</StructureSection>
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(as it appears on PubMed at http://www.pubmed.gov), where 8656429 is the PubMed ID number.
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{{ABSTRACT_PUBMED_8656429}}
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==About this Structure==
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2PEL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1pel 1pel]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEL OCA].
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==Reference==
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Conformation, protein-carbohydrate interactions and a novel subunit association in the refined structure of peanut lectin-lactose complex., Banerjee R, Das K, Ravishankar R, Suguna K, Surolia A, Vijayan M, J Mol Biol. 1996 Jun 7;259(2):281-96. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8656429 8656429]
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[[Category: Arachis hypogaea]]
[[Category: Arachis hypogaea]]
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[[Category: Single protein]]
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[[Category: Concanavalin A and Circular Permutation]]
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[[Category: Banerjee, R.]]
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[[Category: Large Structures]]
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[[Category: Das, K.]]
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[[Category: RCSB PDB Molecule of the Month]]
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[[Category: Ravishankar, R.]]
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[[Category: Banerjee R]]
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[[Category: Suguna, K.]]
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[[Category: Das K]]
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[[Category: Surolia, A.]]
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[[Category: Ravishankar R]]
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[[Category: Vijayan, M.]]
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[[Category: Suguna K]]
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[[Category: Agglutinin]]
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[[Category: Surolia A]]
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[[Category: Carbohydrate specificity]]
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[[Category: Vijayan M]]
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[[Category: Legume lectin]]
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[[Category: Open quaternary structure]]
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[[Category: Protein crystallography]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 14:58:23 2008''
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Current revision

PEANUT LECTIN

PDB ID 2pel

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