1ww9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:34, 13 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1ww9.png|left|200px]]
 
-
<!--
+
==Crystal structure of the terminal oxygenase component of carbazole 1,9a-dioxygenase, a non-heme iron oxygenase system catalyzing the novel angular dioxygenation for carbazole and dioxin==
-
The line below this paragraph, containing "STRUCTURE_1ww9", creates the "Structure Box" on the page.
+
<StructureSection load='1ww9' size='340' side='right'caption='[[1ww9]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ww9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Janthinobacterium_sp._J3 Janthinobacterium sp. J3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WW9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WW9 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene></td></tr>
-
{{STRUCTURE_1ww9| PDB=1ww9 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ww9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ww9 OCA], [https://pdbe.org/1ww9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ww9 RCSB], [https://www.ebi.ac.uk/pdbsum/1ww9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ww9 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q84II6_JANS3 Q84II6_JANS3]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ww/1ww9_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ww9 ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of the terminal oxygenase component of carbazole 1,9a-dioxygenase, a non-heme iron oxygenase system catalyzing the novel angular dioxygenation for carbazole and dioxin===
+
==See Also==
-
 
+
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16005887}}, adds the Publication Abstract to the page
+
[[Category: Janthinobacterium sp. J3]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 16005887 is the PubMed ID number.
+
[[Category: Large Structures]]
-
-->
+
[[Category: Ashikawa Y]]
-
{{ABSTRACT_PUBMED_16005887}}
+
[[Category: Fujimoto Z]]
-
 
+
[[Category: Habe H]]
-
==About this Structure==
+
[[Category: Mizuno H]]
-
1WW9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Janthinobacterium_sp._j3 Janthinobacterium sp. j3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WW9 OCA].
+
[[Category: Nam J-W]]
-
 
+
[[Category: Noguchi H]]
-
==Reference==
+
[[Category: Nojiri H]]
-
Structure of the terminal oxygenase component of angular dioxygenase, carbazole 1,9a-dioxygenase., Nojiri H, Ashikawa Y, Noguchi H, Nam JW, Urata M, Fujimoto Z, Uchimura H, Terada T, Nakamura S, Shimizu K, Yoshida T, Habe H, Omori T, J Mol Biol. 2005 Aug 12;351(2):355-70. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16005887 16005887]
+
[[Category: Omori T]]
-
[[Category: Janthinobacterium sp. j3]]
+
[[Category: Urata M]]
-
[[Category: Single protein]]
+
[[Category: Yoshida T]]
-
[[Category: Ashikawa, Y.]]
+
-
[[Category: Fujimoto, Z.]]
+
-
[[Category: Habe, H.]]
+
-
[[Category: Mizuno, H.]]
+
-
[[Category: Nam, J W.]]
+
-
[[Category: Noguchi, H.]]
+
-
[[Category: Nojiri, H.]]
+
-
[[Category: Omori, T.]]
+
-
[[Category: Urata, M.]]
+
-
[[Category: Yoshida, T.]]
+
-
[[Category: Angular dioxygenase]]
+
-
[[Category: Carbazole 1,9a-dioxygenase]]
+
-
[[Category: Rieske non-heme iron oxygenase system]]
+
-
[[Category: Terminal oxygenase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 15:29:54 2008''
+

Current revision

Crystal structure of the terminal oxygenase component of carbazole 1,9a-dioxygenase, a non-heme iron oxygenase system catalyzing the novel angular dioxygenation for carbazole and dioxin

PDB ID 1ww9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools