1uaa

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:44, 14 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1uaa.png|left|200px]]
 
-
<!--
+
==E. COLI REP HELICASE/DNA COMPLEX==
-
The line below this paragraph, containing "STRUCTURE_1uaa", creates the "Structure Box" on the page.
+
<StructureSection load='1uaa' size='340' side='right'caption='[[1uaa]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1uaa]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UAA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UAA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uaa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uaa OCA], [https://pdbe.org/1uaa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uaa RCSB], [https://www.ebi.ac.uk/pdbsum/1uaa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uaa ProSAT]</span></td></tr>
-
{{STRUCTURE_1uaa| PDB=1uaa | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/REP_ECOLI REP_ECOLI] Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ua/1uaa_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uaa ConSurf].
 +
<div style="clear:both"></div>
-
===E. COLI REP HELICASE/DNA COMPLEX===
+
==See Also==
-
 
+
*[[Helicase|Helicase]]
-
 
+
*[[Helicase 3D structures|Helicase 3D structures]]
-
<!--
+
__TOC__
-
The line below this paragraph, {{ABSTRACT_PUBMED_9288744}}, adds the Publication Abstract to the page
+
</StructureSection>
-
(as it appears on PubMed at http://www.pubmed.gov), where 9288744 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_9288744}}
+
-
 
+
-
==About this Structure==
+
-
1UAA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UAA OCA].
+
-
 
+
-
==Reference==
+
-
Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep helicase bound to single-stranded DNA and ADP., Korolev S, Hsieh J, Gauss GH, Lohman TM, Waksman G, Cell. 1997 Aug 22;90(4):635-47. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9288744 9288744]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Single protein]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: Korolev, S.]]
+
[[Category: Large Structures]]
-
[[Category: Waksman, G.]]
+
[[Category: Korolev S]]
-
[[Category: Dna unwinding]]
+
[[Category: Waksman G]]
-
[[Category: Helicase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 15:57:51 2008''
+

Current revision

E. COLI REP HELICASE/DNA COMPLEX

PDB ID 1uaa

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools