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1qpa

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{{Seed}}
 
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[[Image:1qpa.png|left|200px]]
 
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<!--
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==LIGNIN PEROXIDASE ISOZYME LIP4.65 (PI 4.65)==
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The line below this paragraph, containing "STRUCTURE_1qpa", creates the "Structure Box" on the page.
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<StructureSection load='1qpa' size='340' side='right'caption='[[1qpa]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1qpa]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Phanerodontia_chrysosporium Phanerodontia chrysosporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QPA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QPA FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=HTR:BETA-HYDROXYTRYPTOPHANE'>HTR</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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{{STRUCTURE_1qpa| PDB=1qpa | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qpa OCA], [https://pdbe.org/1qpa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qpa RCSB], [https://www.ebi.ac.uk/pdbsum/1qpa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qpa ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/LIG4_PHACH LIG4_PHACH] Depolymerization of lignin. Catalyzes the C(alpha)-C(beta) cleavage of the propyl side chains of lignin.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qp/1qpa_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qpa ConSurf].
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<div style="clear:both"></div>
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===LIGNIN PEROXIDASE ISOZYME LIP4.65 (PI 4.65)===
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==See Also==
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*[[Beta-N-acetylhexosaminidase 3D structures|Beta-N-acetylhexosaminidase 3D structures]]
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*[[Lignin peroxidase|Lignin peroxidase]]
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__TOC__
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The line below this paragraph, {{ABSTRACT_PUBMED_10024453}}, adds the Publication Abstract to the page
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</StructureSection>
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(as it appears on PubMed at http://www.pubmed.gov), where 10024453 is the PubMed ID number.
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[[Category: Large Structures]]
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[[Category: Phanerodontia chrysosporium]]
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{{ABSTRACT_PUBMED_10024453}}
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[[Category: Choinowski TH]]
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[[Category: Piontek K]]
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==About this Structure==
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1QPA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Basidiomycete_phanerochaete_chrysosporium Basidiomycete phanerochaete chrysosporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QPA OCA].
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==Reference==
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The crystal structure of lignin peroxidase at 1.70 A resolution reveals a hydroxy group on the cbeta of tryptophan 171: a novel radical site formed during the redox cycle., Choinowski T, Blodig W, Winterhalter KH, Piontek K, J Mol Biol. 1999 Feb 26;286(3):809-27. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10024453 10024453]
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[[Category: Basidiomycete phanerochaete chrysosporium]]
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[[Category: Single protein]]
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[[Category: Choinowski, T H.]]
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[[Category: Piontek, K.]]
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[[Category: Glycoprotein]]
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[[Category: Heme]]
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[[Category: Lignin degradation]]
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[[Category: Oxidoreductase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 16:07:28 2008''
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Current revision

LIGNIN PEROXIDASE ISOZYME LIP4.65 (PI 4.65)

PDB ID 1qpa

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