We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

3dpt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:24, 20 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3dpt is ON HOLD until Paper Publication
+
==COR domain of Rab family protein (Roco)==
-
 
+
<StructureSection load='3dpt' size='340' side='right'caption='[[3dpt]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-
Authors: Gotthardt, K., Weyand, M., Kortholt, A., Van Haastert, P.J.M., Wittinghofer, A.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3dpt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlorobaculum_tepidum Chlorobaculum tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DPT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DPT FirstGlance]. <br>
-
Description: COR domain of Rab family protein (Roco)
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dpt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dpt OCA], [https://pdbe.org/3dpt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dpt RCSB], [https://www.ebi.ac.uk/pdbsum/3dpt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dpt ProSAT]</span></td></tr>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 6 12:28:58 2008''
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8KC98_CHLTE Q8KC98_CHLTE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dp/3dpt_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dpt ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Chlorobaculum tepidum]]
 +
[[Category: Large Structures]]
 +
[[Category: Gotthardt K]]
 +
[[Category: Kortholt A]]
 +
[[Category: Van Haastert PJM]]
 +
[[Category: Weyand M]]
 +
[[Category: Wittinghofer A]]

Current revision

COR domain of Rab family protein (Roco)

PDB ID 3dpt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools