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3dpt

From Proteopedia

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{{Seed}}
 
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[[Image:3dpt.png|left|200px]]
 
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<!--
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==COR domain of Rab family protein (Roco)==
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The line below this paragraph, containing "STRUCTURE_3dpt", creates the "Structure Box" on the page.
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<StructureSection load='3dpt' size='340' side='right'caption='[[3dpt]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3dpt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlorobaculum_tepidum Chlorobaculum tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DPT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DPT FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dpt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dpt OCA], [https://pdbe.org/3dpt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dpt RCSB], [https://www.ebi.ac.uk/pdbsum/3dpt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dpt ProSAT]</span></td></tr>
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{{STRUCTURE_3dpt| PDB=3dpt | SCENE= }}
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</table>
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== Function ==
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===COR domain of Rab family protein (Roco)===
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[https://www.uniprot.org/uniprot/Q8KC98_CHLTE Q8KC98_CHLTE]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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<!--
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Check<jmol>
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The line below this paragraph, {{ABSTRACT_PUBMED_18650931}}, adds the Publication Abstract to the page
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<jmolCheckbox>
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(as it appears on PubMed at http://www.pubmed.gov), where 18650931 is the PubMed ID number.
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dp/3dpt_consurf.spt"</scriptWhenChecked>
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-->
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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{{ABSTRACT_PUBMED_18650931}}
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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==About this Structure==
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dpt ConSurf].
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3DPT is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Chlorobaculum_tepidum Chlorobaculum tepidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DPT OCA].
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<div style="clear:both"></div>
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__TOC__
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==Reference==
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</StructureSection>
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Structure of the Roc-COR domain tandem of C. tepidum, a prokaryotic homologue of the human LRRK2 Parkinson kinase., Gotthardt K, Weyand M, Kortholt A, Van Haastert PJ, Wittinghofer A, EMBO J. 2008 Jul 24. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18650931 18650931]
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[[Category: Chlorobaculum tepidum]]
[[Category: Chlorobaculum tepidum]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Gotthardt, K.]]
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[[Category: Gotthardt K]]
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[[Category: Haastert, P J.M Van.]]
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[[Category: Kortholt A]]
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[[Category: Kortholt, A.]]
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[[Category: Van Haastert PJM]]
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[[Category: Weyand, M.]]
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[[Category: Weyand M]]
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[[Category: Wittinghofer, A.]]
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[[Category: Wittinghofer A]]
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[[Category: Alpha-beta-protein]]
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[[Category: Cor]]
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[[Category: Signaling protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 3 10:35:21 2008''
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Current revision

COR domain of Rab family protein (Roco)

PDB ID 3dpt

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