2vw7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:09, 1 May 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2vw7.jpg|left|200px]]
 
-
<!--
+
==Nitrite reductase from Alcaligenes xylosoxidans - 1 of 3==
-
The line below this paragraph, containing "STRUCTURE_2vw7", creates the "Structure Box" on the page.
+
<StructureSection load='2vw7' size='340' side='right'caption='[[2vw7]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2vw7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VW7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VW7 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2vw7| PDB=2vw7 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vw7 OCA], [https://pdbe.org/2vw7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vw7 RCSB], [https://www.ebi.ac.uk/pdbsum/2vw7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vw7 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O68601_ALCXX O68601_ALCXX]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vw/2vw7_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vw7 ConSurf].
 +
<div style="clear:both"></div>
-
===NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS - 1 OF 3===
+
==See Also==
-
 
+
*[[Nitrite reductase 3D structures|Nitrite reductase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_18728313}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 18728313 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_18728313}}
+
-
 
+
-
==About this Structure==
+
-
2VW7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VW7 OCA].
+
-
 
+
-
==Reference==
+
-
On-line optical and X-ray spectroscopies with crystallography: an integrated approach for determining metalloprotein structures in functionally well defined states., Ellis MJ, Buffey SG, Hough MA, Hasnain SS, J Synchrotron Radiat. 2008 Sep;15(Pt 5):433-9. Epub 2008 Jul 22. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18728313 18728313]
+
[[Category: Achromobacter xylosoxidans]]
[[Category: Achromobacter xylosoxidans]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Buffey, S G.]]
+
[[Category: Buffey SG]]
-
[[Category: Ellis, M J.]]
+
[[Category: Ellis MJ]]
-
[[Category: Hasnain, S S.]]
+
[[Category: Hasnain SS]]
-
[[Category: Hough, M A.]]
+
[[Category: Hough MA]]
-
[[Category: Denitrification]]
+
-
[[Category: Microspectrophotometer]]
+
-
[[Category: Nitrite reductase]]
+
-
[[Category: Ordered mechanism]]
+
-
[[Category: Oxidoreductase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 10 10:34:49 2008''
+

Current revision

Nitrite reductase from Alcaligenes xylosoxidans - 1 of 3

PDB ID 2vw7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools