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3edm
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3edm is ON HOLD Authors: Bonanno, J.B., Rutter, M., Bain, K.T., Chang, S., Romero, R., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New Yo...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of a short chain dehydrogenase from Agrobacterium tumefaciens== | |
| - | + | <StructureSection load='3edm' size='340' side='right'caption='[[3edm]], [[Resolution|resolution]] 2.30Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3edm]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EDM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EDM FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3edm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3edm OCA], [https://pdbe.org/3edm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3edm RCSB], [https://www.ebi.ac.uk/pdbsum/3edm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3edm ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3edm TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A9CEK0_AGRFC A9CEK0_AGRFC] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ed/3edm_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3edm ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Agrobacterium fabrum str. C58]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Almo SC]] | ||
| + | [[Category: Bain KT]] | ||
| + | [[Category: Bonanno JB]] | ||
| + | [[Category: Burley SK]] | ||
| + | [[Category: Chang S]] | ||
| + | [[Category: Romero R]] | ||
| + | [[Category: Rutter M]] | ||
| + | [[Category: Sauder JM]] | ||
| + | [[Category: Wasserman S]] | ||
Current revision
Crystal structure of a short chain dehydrogenase from Agrobacterium tumefaciens
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