This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1be7
From Proteopedia
(Difference between revisions)
(New page: 200px<br /> <applet load="1be7" size="450" color="white" frame="true" align="right" spinBox="true" caption="1be7, resolution 1.65Å" /> '''CLOSTRIDIUM PASTEUR...) |
|||
| (22 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1be7.gif|left|200px]]<br /> | ||
| - | <applet load="1be7" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1be7, resolution 1.65Å" /> | ||
| - | '''CLOSTRIDIUM PASTEURIANUM RUBREDOXIN C42S MUTANT'''<br /> | ||
| - | == | + | ==CLOSTRIDIUM PASTEURIANUM RUBREDOXIN C42S MUTANT== |
| - | + | <StructureSection load='1be7' size='340' side='right'caption='[[1be7]], [[Resolution|resolution]] 1.65Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[1be7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_pasteurianum Clostridium pasteurianum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BE7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BE7 FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65Å</td></tr> |
| - | [ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1be7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1be7 OCA], [https://pdbe.org/1be7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1be7 RCSB], [https://www.ebi.ac.uk/pdbsum/1be7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1be7 ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | [ | + | == Function == |
| - | [[ | + | [https://www.uniprot.org/uniprot/RUBR_CLOPA RUBR_CLOPA] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule. |
| - | [ | + | == Evolutionary Conservation == |
| - | [[ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/1be7_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1be7 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Rubredoxin 3D structures|Rubredoxin 3D structures]] | ||
| + | *[[Rubredoxin PDB structures|Rubredoxin PDB structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Clostridium pasteurianum]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Guss JM]] | ||
| + | [[Category: Maher M]] | ||
| + | [[Category: Wedd AG]] | ||
| + | [[Category: Wilce M]] | ||
Current revision
CLOSTRIDIUM PASTEURIANUM RUBREDOXIN C42S MUTANT
| |||||||||||
