3dan

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{{Seed}}
 
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[[Image:3dan.jpg|left|200px]]
 
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==Crystal Structure of Allene oxide synthase==
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The line below this paragraph, containing "STRUCTURE_3dan", creates the "Structure Box" on the page.
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<StructureSection load='3dan' size='340' side='right'caption='[[3dan]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3dan]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Parthenium_argentatum Parthenium argentatum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DAN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DAN FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
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{{STRUCTURE_3dan| PDB=3dan | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dan FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dan OCA], [https://pdbe.org/3dan PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dan RCSB], [https://www.ebi.ac.uk/pdbsum/3dan PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dan ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/C74A2_PARAR C74A2_PARAR] Involved in the biosynthesis of jasmonic acid, a growth regulator that is implicated also as a signaling molecule in plant defense. Acts on a number of unsaturated fatty-acid hydroperoxides, forming the corresponding allene oxides (By similarity).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/da/3dan_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dan ConSurf].
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<div style="clear:both"></div>
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===Crystal Structure of Allene oxide synthase===
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==See Also==
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*[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_18787124}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 18787124 is the PubMed ID number.
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{{ABSTRACT_PUBMED_18787124}}
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==About this Structure==
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3DAN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Parthenium_argentatum Parthenium argentatum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DAN OCA].
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==Reference==
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Modes of heme binding and substrate access for cytochrome P450 CYP74A revealed by crystal structures of allene oxide synthase., Li L, Chang Z, Pan Z, Fu ZQ, Wang X, Proc Natl Acad Sci U S A. 2008 Sep 16;105(37):13883-8. Epub 2008 Sep 11. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18787124 18787124]
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[[Category: Hydroperoxide dehydratase]]
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[[Category: Parthenium argentatum]]
[[Category: Parthenium argentatum]]
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[[Category: Single protein]]
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[[Category: Li L]]
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[[Category: Li, L.]]
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[[Category: Wang X]]
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[[Category: Wang, X.]]
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[[Category: Aos heme cytochrome p450 structure]]
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[[Category: Fatty acid biosynthesis]]
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[[Category: Heme]]
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[[Category: Iron]]
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[[Category: Lipid synthesis]]
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[[Category: Lyase]]
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[[Category: Metal-binding]]
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[[Category: Oxylipin biosynthesis]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 24 10:40:28 2008''
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Current revision

Crystal Structure of Allene oxide synthase

PDB ID 3dan

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