2gax

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:13, 17 October 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2gax.png|left|200px]]
 
-
<!--
+
==Structure of Protein of Unknown Function Atu0240 from Agrobacteriium tumerfaciencs str. C58==
-
The line below this paragraph, containing "STRUCTURE_2gax", creates the "Structure Box" on the page.
+
<StructureSection load='2gax' size='340' side='right'caption='[[2gax]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2gax]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GAX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GAX FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.801&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_2gax| PDB=2gax | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gax OCA], [https://pdbe.org/2gax PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gax RCSB], [https://www.ebi.ac.uk/pdbsum/2gax PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gax ProSAT], [https://www.topsan.org/Proteins/MCSG/2gax TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Structure of Protein of Unknown Function Atu0240 from Agrobacteriium tumerfaciencs str. C58===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/A9CKI6_AGRFC A9CKI6_AGRFC]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2GAX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GAX OCA].
+
Check<jmol>
-
[[Category: Agrobacterium tumefaciens]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ga/2gax_consurf.spt"</scriptWhenChecked>
-
[[Category: Binkowski, T A.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Edwards, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Evdokimova, E.]]
+
</jmolCheckbox>
-
[[Category: Joachimiak, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gax ConSurf].
-
[[Category: Kudritska, M.]]
+
<div style="clear:both"></div>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
__TOC__
-
[[Category: Agrobacterium tumfacien]]
+
</StructureSection>
-
[[Category: Hypothetical protein]]
+
[[Category: Agrobacterium fabrum str. C58]]
-
[[Category: Mcsg]]
+
[[Category: Large Structures]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Binkowski TA]]
-
[[Category: Protein structure initiative]]
+
[[Category: Edwards A]]
-
[[Category: Psi]]
+
[[Category: Evdokimova E]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
 
+
[[Category: Kudritska M]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 15:02:48 2008''
+

Current revision

Structure of Protein of Unknown Function Atu0240 from Agrobacteriium tumerfaciencs str. C58

PDB ID 2gax

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2gax"
Personal tools