3co5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:33, 26 March 2025) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3co5.png|left|200px]]
 
-
<!--
+
==Crystal structure of sigma-54 interaction domain of putative transcriptional response regulator from Neisseria gonorrhoeae==
-
The line below this paragraph, containing "STRUCTURE_3co5", creates the "Structure Box" on the page.
+
<StructureSection load='3co5' size='340' side='right'caption='[[3co5]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3co5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_gonorrhoeae_FA_1090 Neisseria gonorrhoeae FA 1090]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CO5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CO5 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3co5| PDB=3co5 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3co5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3co5 OCA], [https://pdbe.org/3co5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3co5 RCSB], [https://www.ebi.ac.uk/pdbsum/3co5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3co5 ProSAT], [https://www.topsan.org/Proteins/MCSG/3co5 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of sigma-54 interaction domain of putative transcriptional response regulator from Neisseria gonorrhoeae===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q5F5Q1_NEIG1 Q5F5Q1_NEIG1]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3CO5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Neisseria_gonorrhoeae_fa_1090 Neisseria gonorrhoeae fa 1090]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CO5 OCA].
+
Check<jmol>
-
[[Category: Neisseria gonorrhoeae fa 1090]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/co/3co5_consurf.spt"</scriptWhenChecked>
-
[[Category: Bigelow, L.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Clancy, S.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Hendricks, R.]]
+
</jmolCheckbox>
-
[[Category: Joachimiak, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3co5 ConSurf].
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: Osipiuk, J.]]
+
__TOC__
-
[[Category: Apc89341 1]]
+
</StructureSection>
-
[[Category: Mcsg]]
+
[[Category: Large Structures]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Neisseria gonorrhoeae FA 1090]]
-
[[Category: Protein structure initiative]]
+
[[Category: Bigelow L]]
-
[[Category: Psi-2]]
+
[[Category: Clancy S]]
-
[[Category: Sigma-54 interaction domain]]
+
[[Category: Hendricks R]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Transcription regulator]]
+
[[Category: Osipiuk J]]
-
[[Category: Transcriptional response regulator]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 15:41:23 2008''
+

Current revision

Crystal structure of sigma-54 interaction domain of putative transcriptional response regulator from Neisseria gonorrhoeae

PDB ID 3co5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3co5"
Personal tools