2h09

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:52, 13 March 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2h09.png|left|200px]]
 
-
<!--
+
==Crystal structure of diphtheria toxin repressor like protein from E. coli==
-
The line below this paragraph, containing "STRUCTURE_2h09", creates the "Structure Box" on the page.
+
<StructureSection load='2h09' size='340' side='right'caption='[[2h09]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2h09]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H09 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2H09 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2h09 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h09 OCA], [https://pdbe.org/2h09 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2h09 RCSB], [https://www.ebi.ac.uk/pdbsum/2h09 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2h09 ProSAT], [https://www.topsan.org/Proteins/RSGI/2h09 TOPSAN]</span></td></tr>
-
{{STRUCTURE_2h09| PDB=2h09 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of diphtheria toxin repressor like protein from E. coli===
+
[https://www.uniprot.org/uniprot/MNTR_ECOLI MNTR_ECOLI] In the presence of manganese, represses expression of mntH and mntS. Up-regulates expression of mntP.<ref>PMID:11466284</ref> <ref>PMID:21908668</ref>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_9697776}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 9697776 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h0/2h09_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_9697776}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2h09 ConSurf].
-
2H09 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H09 OCA].
+
<div style="clear:both"></div>
-
 
+
== References ==
-
==Reference==
+
<references/>
-
Structure of the metal-ion-activated diphtheria toxin repressor/tox operator complex., White A, Ding X, vanderSpek JC, Murphy JR, Ringe D, Nature. 1998 Jul 30;394(6692):502-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9697776 9697776]
+
__TOC__
-
 
+
</StructureSection>
-
Structure of the manganese-bound manganese transport regulator of Bacillus subtilis., Glasfeld A, Guedon E, Helmann JD, Brennan RG, Nat Struct Biol. 2003 Aug;10(8):652-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12847518 12847518]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Kumarevel, T S.]]
+
[[Category: Kumarevel TS]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Shinkai A]]
-
[[Category: Shinkai, A.]]
+
[[Category: Tanaka T]]
-
[[Category: Tanaka, T.]]
+
[[Category: Yokoyama S]]
-
[[Category: Yokoyama, S.]]
+
-
[[Category: Diphtheria toxin]]
+
-
[[Category: Manganese transport]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Transcription regulator]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 17:32:03 2008''
+

Current revision

Crystal structure of diphtheria toxin repressor like protein from E. coli

PDB ID 2h09

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools