1yox

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:42, 30 October 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1yox.png|left|200px]]
 
-
<!--
+
==Structure of the conserved Protein of Unknown Function PA3696 from Pseudomonas aeruginosa==
-
The line below this paragraph, containing "STRUCTURE_1yox", creates the "Structure Box" on the page.
+
<StructureSection load='1yox' size='340' side='right'caption='[[1yox]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1yox]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YOX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YOX FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1yox| PDB=1yox | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yox FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yox OCA], [https://pdbe.org/1yox PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yox RCSB], [https://www.ebi.ac.uk/pdbsum/1yox PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yox ProSAT], [https://www.topsan.org/Proteins/MCSG/1yox TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Structure of the conserved Protein of Unknown Function PA3696 from Pseudomonas aeruginosa===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9HXU4_PSEAE Q9HXU4_PSEAE]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1YOX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YOX OCA].
+
Check<jmol>
-
[[Category: Pseudomonas aeruginosa pao1]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yo/1yox_consurf.spt"</scriptWhenChecked>
-
[[Category: Edwards, A.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Gu, J.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Joachimiak, A.]]
+
</jmolCheckbox>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yox ConSurf].
-
[[Category: Savchenko, A.]]
+
<div style="clear:both"></div>
-
[[Category: Walker, J R.]]
+
__TOC__
-
[[Category: Xu, X.]]
+
</StructureSection>
-
[[Category: Mcsg]]
+
[[Category: Large Structures]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Protein structure initiative]]
+
[[Category: Edwards A]]
-
[[Category: Psi]]
+
[[Category: Gu J]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
 
+
[[Category: Savchenko A]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 17:43:13 2008''
+
[[Category: Walker JR]]
 +
[[Category: Xu X]]

Current revision

Structure of the conserved Protein of Unknown Function PA3696 from Pseudomonas aeruginosa

PDB ID 1yox

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1yox"
Personal tools