2pcs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:09, 21 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2pcs.png|left|200px]]
 
-
<!--
+
==Crystal structure of conserved protein from Geobacillus kaustophilus==
-
The line below this paragraph, containing "STRUCTURE_2pcs", creates the "Structure Box" on the page.
+
<StructureSection load='2pcs' size='340' side='right'caption='[[2pcs]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2pcs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PCS FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-
{{STRUCTURE_2pcs| PDB=2pcs | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pcs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcs OCA], [https://pdbe.org/2pcs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pcs RCSB], [https://www.ebi.ac.uk/pdbsum/2pcs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcs ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2pcs TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of conserved protein from Geobacillus kaustophilus===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q5QL47_GEOKA Q5QL47_GEOKA]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2PCS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCS OCA].
+
Check<jmol>
-
[[Category: Geobacillus kaustophilus]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pc/2pcs_consurf.spt"</scriptWhenChecked>
-
[[Category: Almo, S C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Bain, K T.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Bonanno, J B.]]
+
</jmolCheckbox>
-
[[Category: Burley, S K.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pcs ConSurf].
-
[[Category: Gilmore, J.]]
+
<div style="clear:both"></div>
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
__TOC__
-
[[Category: Romero, R.]]
+
</StructureSection>
-
[[Category: Sauder, M J.]]
+
[[Category: Geobacillus kaustophilus HTA426]]
-
[[Category: Smith, D.]]
+
[[Category: Large Structures]]
-
[[Category: Wasserman, S.]]
+
[[Category: Almo SC]]
-
[[Category: Wu, B.]]
+
[[Category: Bain KT]]
-
[[Category: Ligand binding]]
+
[[Category: Bonanno JB]]
-
[[Category: New york structural genomix research consortium]]
+
[[Category: Burley SK]]
-
[[Category: Nysgxrc]]
+
[[Category: Gilmore J]]
-
[[Category: Protein structure initiative]]
+
[[Category: Romero R]]
-
[[Category: Psi-2]]
+
[[Category: Sauder JM]]
-
[[Category: Structural genomic]]
+
[[Category: Smith D]]
-
[[Category: Unknown function]]
+
[[Category: Wasserman S]]
-
 
+
[[Category: Wu B]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 17:47:03 2008''
+

Current revision

Crystal structure of conserved protein from Geobacillus kaustophilus

PDB ID 2pcs

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools