3cjn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:40, 21 November 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3cjn.png|left|200px]]
 
-
<!--
+
==Crystal structure of transcriptional regulator, MarR family, from Silicibacter pomeroyi==
-
The line below this paragraph, containing "STRUCTURE_3cjn", creates the "Structure Box" on the page.
+
<StructureSection load='3cjn' size='340' side='right'caption='[[3cjn]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3cjn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruegeria_pomeroyi_DSS-3 Ruegeria pomeroyi DSS-3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CJN FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_3cjn| PDB=3cjn | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cjn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjn OCA], [https://pdbe.org/3cjn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cjn RCSB], [https://www.ebi.ac.uk/pdbsum/3cjn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cjn ProSAT], [https://www.topsan.org/Proteins/MCSG/3cjn TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cj/3cjn_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cjn ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of transcriptional regulator, MarR family, from Silicibacter pomeroyi===
+
==See Also==
-
 
+
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3CJN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJN OCA].
+
[[Category: Large Structures]]
-
[[Category: Bacteria]]
+
[[Category: Ruegeria pomeroyi DSS-3]]
-
[[Category: Single protein]]
+
[[Category: Chang C]]
-
[[Category: Chang, C.]]
+
[[Category: Freeman L]]
-
[[Category: Freeman, L.]]
+
[[Category: Joachimiak A]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Volkart L]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
-
[[Category: Volkart, L.]]
+
-
[[Category: Dna-binding]]
+
-
[[Category: Marr family]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Silicibacter pomeroyi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Transcription regulation]]
+
-
[[Category: Transcription regulator]]
+
-
[[Category: Transcriptional regulator]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 18:06:04 2008''
+

Current revision

Crystal structure of transcriptional regulator, MarR family, from Silicibacter pomeroyi

PDB ID 3cjn

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools