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2pkw

From Proteopedia

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{{Seed}}
 
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[[Image:2pkw.png|left|200px]]
 
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<!--
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==Crystal structure of UPF0341 protein yhiQ from Salmonella typhimurium, Northeast Structural Genomics Consortium Target StR221==
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The line below this paragraph, containing "STRUCTURE_2pkw", creates the "Structure Box" on the page.
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<StructureSection load='2pkw' size='340' side='right'caption='[[2pkw]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2pkw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PKW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PKW FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
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-->
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_2pkw| PDB=2pkw | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yhiQ, STM3593 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=99287 SALTY])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pkw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pkw OCA], [https://pdbe.org/2pkw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pkw RCSB], [https://www.ebi.ac.uk/pdbsum/2pkw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pkw ProSAT], [https://www.topsan.org/Proteins/NESGC/2pkw TOPSAN]</span></td></tr>
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===Crystal structure of UPF0341 protein yhiQ from Salmonella typhimurium, Northeast Structural Genomics Consortium Target StR221===
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</table>
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== Function ==
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[[https://www.uniprot.org/uniprot/RSMJ_SALTY RSMJ_SALTY]] Specifically methylates the guanosine in position 1516 of 16S rRNA.[HAMAP-Rule:MF_01523]
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==About this Structure==
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== Evolutionary Conservation ==
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2PKW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PKW OCA].
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Salmonella typhimurium]]
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Check<jmol>
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[[Category: Single protein]]
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<jmolCheckbox>
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[[Category: Acton, T B.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pkw_consurf.spt"</scriptWhenChecked>
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[[Category: Cunningham, K.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Fang, Y.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Forouhar, F.]]
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</jmolCheckbox>
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[[Category: Hunt, J F.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pkw ConSurf].
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[[Category: Liu, J.]]
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<div style="clear:both"></div>
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[[Category: Ma, L-C.]]
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__TOC__
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[[Category: Montelione, G T.]]
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</StructureSection>
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Large Structures]]
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[[Category: Owens, L.]]
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[[Category: Salty]]
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[[Category: Seetharaman, J.]]
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[[Category: Acton, T B]]
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[[Category: Su, M.]]
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[[Category: Cunningham, K]]
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[[Category: Tong, L.]]
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[[Category: Fang, Y]]
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[[Category: Xiao, R.]]
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[[Category: Forouhar, F]]
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[[Category: Hunt, J F]]
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[[Category: Liu, J]]
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[[Category: Ma, L C]]
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[[Category: Montelione, G T]]
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[[Category: Structural genomic]]
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[[Category: Owens, L]]
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[[Category: Seetharaman, J]]
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[[Category: Su, M]]
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[[Category: Tong, L]]
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[[Category: Xiao, R]]
[[Category: Alpha-beta protein]]
[[Category: Alpha-beta protein]]
[[Category: Nesg]]
[[Category: Nesg]]
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[[Category: Northeast structural genomics consortium]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein structure initiative]]
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[[Category: Unknown function]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 19:33:51 2008''
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Current revision

Crystal structure of UPF0341 protein yhiQ from Salmonella typhimurium, Northeast Structural Genomics Consortium Target StR221

PDB ID 2pkw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

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