This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2gs5
From Proteopedia
(Difference between revisions)
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
| - | [[Image:2gs5.png|left|200px]] | ||
| - | + | ==1.5 A Crystal Structure of a Conserved Protein of Unknown Function from Corvnebacterium diphtheriae== | |
| - | + | <StructureSection load='2gs5' size='340' side='right'caption='[[2gs5]], [[Resolution|resolution]] 1.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2gs5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cordi Cordi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GS5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GS5 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GI:38201165 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=257309 CORDI])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gs5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gs5 OCA], [https://pdbe.org/2gs5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gs5 RCSB], [https://www.ebi.ac.uk/pdbsum/2gs5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gs5 ProSAT], [https://www.topsan.org/Proteins/MCSG/2gs5 TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | == | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gs/2gs5_consurf.spt"</scriptWhenChecked> | |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Clancy, S | + | </jmolCheckbox> |
| - | [[Category: Hatzos, C | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gs5 ConSurf]. |
| - | [[Category: Joachimiak, A | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: Zhang, R | + | </StructureSection> |
| + | [[Category: Cordi]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Clancy, S]] | ||
| + | [[Category: Hatzos, C]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Zhang, R]] | ||
[[Category: Corvnebacterium diphtheria]] | [[Category: Corvnebacterium diphtheria]] | ||
[[Category: Hypothetical protein]] | [[Category: Hypothetical protein]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | [[Category: Unknown function]] | |
| - | [[Category: | + | |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
1.5 A Crystal Structure of a Conserved Protein of Unknown Function from Corvnebacterium diphtheriae
| |||||||||||
