2ifa

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:24, 26 March 2025) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2ifa.png|left|200px]]
 
-
<!--
+
==Crystal Structure of the PUTATIVE NITROREDUCTASE (SMU.260) IN COMPLEX WITH FMN FROM STREPTOCOCCUS MUTANS, NORTHEAST STRUCTURAL GENOMICS TARGET SMR5.==
-
The line below this paragraph, containing "STRUCTURE_2ifa", creates the "Structure Box" on the page.
+
<StructureSection load='2ifa' size='340' side='right'caption='[[2ifa]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2ifa]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_mutans_UA159 Streptococcus mutans UA159]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IFA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2ifa| PDB=2ifa | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ifa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ifa OCA], [https://pdbe.org/2ifa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ifa RCSB], [https://www.ebi.ac.uk/pdbsum/2ifa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ifa ProSAT], [https://www.topsan.org/Proteins/NESGC/2ifa TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of the PUTATIVE NITROREDUCTASE (SMU.260) IN COMPLEX WITH FMN FROM STREPTOCOCCUS MUTANS, NORTHEAST STRUCTURAL GENOMICS TARGET SMR5.===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q8DW21_STRMU Q8DW21_STRMU]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2IFA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_mutans Streptococcus mutans]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1yw3 1yw3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFA OCA].
+
Check<jmol>
-
[[Category: Single protein]]
+
<jmolCheckbox>
-
[[Category: Streptococcus mutans]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/if/2ifa_consurf.spt"</scriptWhenChecked>
-
[[Category: Acton, T B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Byler, T.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Chen, Y.]]
+
</jmolCheckbox>
-
[[Category: Forouhar, F.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ifa ConSurf].
-
[[Category: Hunt, J F.]]
+
<div style="clear:both"></div>
-
[[Category: Ma, L C.]]
+
__TOC__
-
[[Category: Montelione, G T.]]
+
</StructureSection>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Large Structures]]
-
[[Category: Tong, L.]]
+
[[Category: Streptococcus mutans UA159]]
-
[[Category: Xiao, R.]]
+
[[Category: Acton TB]]
-
[[Category: Alpha-beta protein]]
+
[[Category: Byler T]]
-
[[Category: Nesg]]
+
[[Category: Chen Y]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Forouhar F]]
-
[[Category: Protein structure initiative]]
+
[[Category: Hunt JF]]
-
[[Category: Psi-2]]
+
[[Category: Ma LC]]
-
[[Category: Structural genomic]]
+
[[Category: Montelione GT]]
-
 
+
[[Category: Tong L]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 22:10:52 2008''
+
[[Category: Xiao R]]

Current revision

Crystal Structure of the PUTATIVE NITROREDUCTASE (SMU.260) IN COMPLEX WITH FMN FROM STREPTOCOCCUS MUTANS, NORTHEAST STRUCTURAL GENOMICS TARGET SMR5.

PDB ID 2ifa

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools