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2im8

From Proteopedia

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{{Seed}}
 
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[[Image:2im8.png|left|200px]]
 
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==X-Ray Crystal Structure of Protein yppE from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR213.==
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The line below this paragraph, containing "STRUCTURE_2im8", creates the "Structure Box" on the page.
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<StructureSection load='2im8' size='340' side='right'caption='[[2im8]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2im8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IM8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IM8 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_2im8| PDB=2im8 | SCENE= }}
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2hfi|2hfi]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yppE ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr>
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===X-Ray Crystal Structure of Protein yppE from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR213.===
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2im8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2im8 OCA], [https://pdbe.org/2im8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2im8 RCSB], [https://www.ebi.ac.uk/pdbsum/2im8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2im8 ProSAT], [https://www.topsan.org/Proteins/NESGC/2im8 TOPSAN]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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2IM8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IM8 OCA].
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Check<jmol>
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[[Category: Bacillus subtilis]]
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<jmolCheckbox>
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[[Category: Single protein]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/im/2im8_consurf.spt"</scriptWhenChecked>
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[[Category: Acton, T B.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Baran, M C.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Cunningham, K.]]
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</jmolCheckbox>
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[[Category: Hang, D.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2im8 ConSurf].
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[[Category: Hunt, J F.]]
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<div style="clear:both"></div>
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[[Category: Janjua, H.]]
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__TOC__
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[[Category: Kuzin, A P.]]
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</StructureSection>
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[[Category: Liu, J.]]
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[[Category: Vibrio subtilis ehrenberg 1835]]
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[[Category: Ma, L C.]]
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[[Category: Large Structures]]
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[[Category: Montelione, G T.]]
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[[Category: Acton, T B]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Baran, M C]]
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[[Category: Rost, B.]]
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[[Category: Cunningham, K]]
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[[Category: Shastry, R.]]
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[[Category: Hang, D]]
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[[Category: Tong, L.]]
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[[Category: Hunt, J F]]
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[[Category: Xiao, R.]]
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[[Category: Janjua, H]]
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[[Category: Kuzin, A P]]
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[[Category: Liu, J]]
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[[Category: Ma, L C]]
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[[Category: Montelione, G T]]
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[[Category: Structural genomic]]
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[[Category: Rost, B]]
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[[Category: Shastry, R]]
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[[Category: Tong, L]]
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[[Category: Xiao, R]]
[[Category: Nesg]]
[[Category: Nesg]]
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[[Category: Northeast structural genomics consortium]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Sr213]]
[[Category: Sr213]]
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[[Category: Structural genomic]]
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[[Category: Unknown function]]
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[[Category: X-ray]]
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[[Category: Yppe]]
[[Category: Yppe]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 00:12:35 2008''
 

Current revision

X-Ray Crystal Structure of Protein yppE from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR213.

PDB ID 2im8

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