This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qq6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:29, 25 June 2021) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2qq6.png|left|200px]]
 
-
<!--
+
==Crystal structure of mandelate racemase/muconate lactonizing enzyme-like protein from Rubrobacter xylanophilus DSM 9941==
-
The line below this paragraph, containing "STRUCTURE_2qq6", creates the "Structure Box" on the page.
+
<StructureSection load='2qq6' size='340' side='right'caption='[[2qq6]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QQ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QQ6 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qq6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qq6 OCA], [https://pdbe.org/2qq6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qq6 RCSB], [https://www.ebi.ac.uk/pdbsum/2qq6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qq6 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qq6 TOPSAN]</span></td></tr>
-
-->
+
</table>
-
{{STRUCTURE_2qq6| PDB=2qq6 | SCENE= }}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
===Crystal structure of mandelate racemase/muconate lactonizing enzyme-like protein from Rubrobacter xylanophilus DSM 9941===
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qq/2qq6_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
2QQ6 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rubrobacter_xylanophilus_dsm_9941 Rubrobacter xylanophilus dsm 9941]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QQ6 OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Rubrobacter xylanophilus dsm 9941]]
+
</jmolCheckbox>
-
[[Category: Single protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qq6 ConSurf].
-
[[Category: Burley, S K.]]
+
<div style="clear:both"></div>
-
[[Category: Eswaramoorthy, S.]]
+
__TOC__
-
[[Category: Madegowda, M.]]
+
</StructureSection>
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Large Structures]]
-
[[Category: Swaminathan, S.]]
+
[[Category: Burley SK]]
-
[[Category: 9367a]]
+
[[Category: Eswaramoorthy S]]
-
[[Category: Enolase]]
+
[[Category: Madegowda M]]
-
[[Category: Isomerase]]
+
[[Category: Swaminathan S]]
-
[[Category: Mg ion]]
+
-
[[Category: New york structural genomix research consortium]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 01:41:28 2008''
+

Current revision

Crystal structure of mandelate racemase/muconate lactonizing enzyme-like protein from Rubrobacter xylanophilus DSM 9941

PDB ID 2qq6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools