2cun

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:20, 25 October 2023) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2cun.png|left|200px]]
 
-
<!--
+
==Crystal structure of Phosphoglycerate Kinase from Pyrococcus horikoshii OT3==
-
The line below this paragraph, containing "STRUCTURE_2cun", creates the "Structure Box" on the page.
+
<StructureSection load='2cun' size='340' side='right'caption='[[2cun]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2cun]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CUN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CUN FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3PG:3-PHOSPHOGLYCERIC+ACID'>3PG</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
-
{{STRUCTURE_2cun| PDB=2cun | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cun FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cun OCA], [https://pdbe.org/2cun PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cun RCSB], [https://www.ebi.ac.uk/pdbsum/2cun PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cun ProSAT], [https://www.topsan.org/Proteins/RSGI/2cun TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PGK_PYRHO PGK_PYRHO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cu/2cun_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cun ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of Phosphoglycerate Kinase from Pyrococcus horikoshii OT3===
+
==See Also==
-
 
+
*[[Phosphoglycerate kinase 3D structures|Phosphoglycerate kinase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2CUN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CUN OCA].
+
[[Category: Large Structures]]
-
[[Category: Phosphoglycerate kinase]]
+
[[Category: Pyrococcus horikoshii OT3]]
-
[[Category: Pyrococcus horikoshii]]
+
[[Category: Kunishima N]]
-
[[Category: Single protein]]
+
[[Category: Mizutani H]]
-
[[Category: Kunishima, N.]]
+
-
[[Category: Mizutani, H.]]
+
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Phosphoglycerate kinase]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Tanpaku 3000]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 02:40:47 2008''
+

Current revision

Crystal structure of Phosphoglycerate Kinase from Pyrococcus horikoshii OT3

PDB ID 2cun

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools