This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2pce

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:09, 21 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2pce.png|left|200px]]
 
-
<!--
+
==Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM==
-
The line below this paragraph, containing "STRUCTURE_2pce", creates the "Structure Box" on the page.
+
<StructureSection load='2pce' size='340' side='right'caption='[[2pce]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2pce]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Roseovarius_nubinhibens_ISM Roseovarius nubinhibens ISM]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PCE FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_2pce| PDB=2pce | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pce FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pce OCA], [https://pdbe.org/2pce PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pce RCSB], [https://www.ebi.ac.uk/pdbsum/2pce PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pce ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2pce TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/A3SNG0_ROSNI A3SNG0_ROSNI]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCE OCA].
+
Check<jmol>
-
[[Category: Almo, S C.]]
+
<jmolCheckbox>
-
[[Category: Bain, K T.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pc/2pce_consurf.spt"</scriptWhenChecked>
-
[[Category: Bonanno, J B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Burley, S K.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Lau, C.]]
+
</jmolCheckbox>
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pce ConSurf].
-
[[Category: Ozyurt, S.]]
+
<div style="clear:both"></div>
-
[[Category: Rutter, M.]]
+
__TOC__
-
[[Category: Sauder, M J.]]
+
</StructureSection>
-
[[Category: Smith, D.]]
+
[[Category: Large Structures]]
-
[[Category: Wasserman, S.]]
+
[[Category: Roseovarius nubinhibens ISM]]
-
[[Category: Enolase]]
+
[[Category: Almo SC]]
-
[[Category: New york structural genomix research consortium]]
+
[[Category: Bain KT]]
-
[[Category: Nysgxrc]]
+
[[Category: Bonanno JB]]
-
[[Category: Protein structure initiative]]
+
[[Category: Burley SK]]
-
[[Category: Psi-2]]
+
[[Category: Lau C]]
-
[[Category: Structural genomic]]
+
[[Category: Ozyurt S]]
-
 
+
[[Category: Rutter M]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 03:34:44 2008''
+
[[Category: Sauder JM]]
 +
[[Category: Smith D]]
 +
[[Category: Wasserman S]]

Current revision

Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM

PDB ID 2pce

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2pce"
Personal tools