2q08

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:13, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2q08.png|left|200px]]
 
-
<!--
+
==Crystal structure of the protein BH0493 from Bacillus halodurans C-125 complexed with ZN==
-
The line below this paragraph, containing "STRUCTURE_2q08", creates the "Structure Box" on the page.
+
<StructureSection load='2q08' size='340' side='right'caption='[[2q08]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2q08]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkalihalobacillus_halodurans_C-125 Alkalihalobacillus halodurans C-125]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q08 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Q08 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2q08| PDB=2q08 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2q08 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q08 OCA], [https://pdbe.org/2q08 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2q08 RCSB], [https://www.ebi.ac.uk/pdbsum/2q08 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2q08 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2q08 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of the protein BH0493 from Bacillus halodurans C-125 complexed with ZN===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9KFI6_HALH5 Q9KFI6_HALH5]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2Q08 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q08 OCA].
+
Check<jmol>
-
[[Category: Bacillus halodurans]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q0/2q08_consurf.spt"</scriptWhenChecked>
-
[[Category: Almo, S C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Burley, S K.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Fedorov, A A.]]
+
</jmolCheckbox>
-
[[Category: Fedorov, E V.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2q08 ConSurf].
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
<div style="clear:both"></div>
-
[[Category: Patskovsky, Y.]]
+
__TOC__
-
[[Category: Raushel, F.]]
+
</StructureSection>
-
[[Category: Sauder, J M.]]
+
[[Category: Alkalihalobacillus halodurans C-125]]
-
[[Category: Glucoronate isomerase]]
+
[[Category: Large Structures]]
-
[[Category: New york structural genomix research consortium]]
+
[[Category: Almo SC]]
-
[[Category: Nysgxrc]]
+
[[Category: Burley SK]]
-
[[Category: Protein structure initiative]]
+
[[Category: Fedorov AA]]
-
[[Category: Psi-2]]
+
[[Category: Fedorov EV]]
-
[[Category: Structural genomic]]
+
[[Category: Patskovsky Y]]
-
[[Category: Target 9247a]]
+
[[Category: Raushel F]]
-
 
+
[[Category: Sauder JM]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 03:39:00 2008''
+

Current revision

Crystal structure of the protein BH0493 from Bacillus halodurans C-125 complexed with ZN

PDB ID 2q08

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools