2o3j

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:29, 30 August 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2o3j.png|left|200px]]
 
-
<!--
+
==Structure of Caenorhabditis Elegans UDP-Glucose Dehydrogenase==
-
The line below this paragraph, containing "STRUCTURE_2o3j", creates the "Structure Box" on the page.
+
<StructureSection load='2o3j' size='340' side='right'caption='[[2o3j]], [[Resolution|resolution]] 1.88&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2o3j]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O3J FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.88&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
{{STRUCTURE_2o3j| PDB=2o3j | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o3j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3j OCA], [https://pdbe.org/2o3j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o3j RCSB], [https://www.ebi.ac.uk/pdbsum/2o3j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o3j ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2o3j TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Structure of Caenorhabditis Elegans UDP-Glucose Dehydrogenase===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/UGDH_CAEEL UGDH_CAEEL] Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate.
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2O3J is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3J OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o3/2o3j_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o3j ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Caenorhabditis elegans]]
[[Category: Caenorhabditis elegans]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: UDP-glucose 6-dehydrogenase]]
+
[[Category: Almo SC]]
-
[[Category: Almo, S C.]]
+
[[Category: Burley SK]]
-
[[Category: Burley, S K.]]
+
[[Category: Milst S]]
-
[[Category: Milst, S.]]
+
[[Category: Patskovsky Y]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Ramagopal U]]
-
[[Category: Patskovsky, Y.]]
+
[[Category: Shi W]]
-
[[Category: Ramagopal, U.]]
+
[[Category: Toro R]]
-
[[Category: Shi, W.]]
+
[[Category: Vidal M]]
-
[[Category: Toro, R.]]
+
[[Category: Wengerter BC]]
-
[[Category: Vidal, M.]]
+
[[Category: Zhan C]]
-
[[Category: Wengerter, B C.]]
+
[[Category: Zhang Y]]
-
[[Category: Zhan, C.]]
+
-
[[Category: Zhang, Y.]]
+
-
[[Category: New york structural genomix research consortium]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Udp-glucose dehydrogenase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 03:48:59 2008''
+

Current revision

Structure of Caenorhabditis Elegans UDP-Glucose Dehydrogenase

PDB ID 2o3j

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools