2i9u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:02, 21 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2i9u.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Guanine Deaminase from C. acetobutylicum with bound guanine in the active site==
-
The line below this paragraph, containing "STRUCTURE_2i9u", creates the "Structure Box" on the page.
+
<StructureSection load='2i9u' size='340' side='right'caption='[[2i9u]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2i9u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_acetobutylicum_ATCC_824 Clostridium acetobutylicum ATCC 824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I9U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I9U FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GUN:GUANINE'>GUN</scene></td></tr>
-
{{STRUCTURE_2i9u| PDB=2i9u | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i9u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i9u OCA], [https://pdbe.org/2i9u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i9u RCSB], [https://www.ebi.ac.uk/pdbsum/2i9u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i9u ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2i9u TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q97MB6_CLOAB Q97MB6_CLOAB]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i9/2i9u_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i9u ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of Guanine Deaminase from C. acetobutylicum with bound guanine in the active site===
+
==See Also==
-
 
+
*[[Deaminase 3D structures|Deaminase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2I9U is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_acetobutylicum Clostridium acetobutylicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I9U OCA].
+
[[Category: Clostridium acetobutylicum ATCC 824]]
-
[[Category: Clostridium acetobutylicum]]
+
[[Category: Large Structures]]
-
[[Category: Guanine deaminase]]
+
[[Category: Burley SK]]
-
[[Category: Single protein]]
+
[[Category: Kumaran D]]
-
[[Category: Burley, S K.]]
+
[[Category: Swaminathan S]]
-
[[Category: Kumaran, D.]]
+
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
-
[[Category: Swaminathan, S.]]
+
-
[[Category: 9246a]]
+
-
[[Category: Amidohydrolase]]
+
-
[[Category: Guanine deaminase]]
+
-
[[Category: New york structural genomix research consortium]]
+
-
[[Category: Nucleotide transport and metabolism]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 06:06:42 2008''
+

Current revision

Crystal Structure of Guanine Deaminase from C. acetobutylicum with bound guanine in the active site

PDB ID 2i9u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools