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2rjb

From Proteopedia

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{{Seed}}
 
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[[Image:2rjb.png|left|200px]]
 
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==Crystal structure of uncharacterized protein YdcJ (SF1787) from Shigella flexneri which includes domain DUF1338. Northeast Structural Genomics Consortium target SfR276==
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The line below this paragraph, containing "STRUCTURE_2rjb", creates the "Structure Box" on the page.
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<StructureSection load='2rjb' size='340' side='right'caption='[[2rjb]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2rjb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"shigella_paradysenteriae"_weldin_1927 "shigella paradysenteriae" weldin 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RJB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RJB FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_2rjb| PDB=2rjb | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">S1487, SF1787 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=623 "Shigella paradysenteriae" Weldin 1927])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rjb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rjb OCA], [https://pdbe.org/2rjb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rjb RCSB], [https://www.ebi.ac.uk/pdbsum/2rjb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rjb ProSAT], [https://www.topsan.org/Proteins/NESGC/2rjb TOPSAN]</span></td></tr>
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===Crystal structure of uncharacterized protein YdcJ (SF1787) from Shigella flexneri which includes domain DUF1338. Northeast Structural Genomics Consortium target SfR276===
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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2RJB is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RJB OCA].
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<jmolCheckbox>
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[[Category: Shigella flexneri]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rj/2rjb_consurf.spt"</scriptWhenChecked>
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[[Category: Single protein]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Acton, T B.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Baran, M C.]]
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</jmolCheckbox>
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[[Category: Chen, Y.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rjb ConSurf].
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[[Category: Cunningham, K.]]
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<div style="clear:both"></div>
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[[Category: Fang, Y.]]
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__TOC__
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[[Category: Hunt, J F.]]
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</StructureSection>
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[[Category: Liu, J.]]
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[[Category: Shigella paradysenteriae weldin 1927]]
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[[Category: Ma, L-C.]]
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[[Category: Large Structures]]
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[[Category: Montelione, G T.]]
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[[Category: Acton, T B]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Baran, M C]]
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[[Category: Rost, B.]]
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[[Category: Chen, Y]]
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[[Category: Seetharaman, J.]]
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[[Category: Cunningham, K]]
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[[Category: Tong, L.]]
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[[Category: Fang, Y]]
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[[Category: Wang, D.]]
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[[Category: Hunt, J F]]
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[[Category: Xia, R.]]
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[[Category: Liu, J]]
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[[Category: Ma, L C]]
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[[Category: Montelione, G T]]
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[[Category: Structural genomic]]
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[[Category: Rost, B]]
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[[Category: Seetharaman, J]]
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[[Category: Tong, L]]
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[[Category: Wang, D]]
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[[Category: Xia, R]]
[[Category: Nesg]]
[[Category: Nesg]]
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[[Category: Northeast structural genomics consortium]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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[[Category: Uncharacterized protein]]
[[Category: Uncharacterized protein]]
[[Category: Unknown function]]
[[Category: Unknown function]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 06:07:25 2008''
 

Current revision

Crystal structure of uncharacterized protein YdcJ (SF1787) from Shigella flexneri which includes domain DUF1338. Northeast Structural Genomics Consortium target SfR276

PDB ID 2rjb

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