This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3cjl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:30, 1 February 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3cjl.png|left|200px]]
 
-
<!--
+
==Crystal structure of a protein of unknown function (eca1910) from pectobacterium atrosepticum scri1043 at 2.20 A resolution==
-
The line below this paragraph, containing "STRUCTURE_3cjl", creates the "Structure Box" on the page.
+
<StructureSection load='3cjl' size='340' side='right'caption='[[3cjl]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3cjl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pectobacterium_atrosepticum_SCRI1043 Pectobacterium atrosepticum SCRI1043]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CJL FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjl OCA], [https://pdbe.org/3cjl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cjl RCSB], [https://www.ebi.ac.uk/pdbsum/3cjl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cjl ProSAT], [https://www.topsan.org/Proteins/JCSG/3cjl TOPSAN]</span></td></tr>
-
{{STRUCTURE_3cjl| PDB=3cjl | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of Domain of Unknown Function (YP_050007.1) from Erwinia carotovora atroseptica SCRI1043 at 2.20 A resolution===
+
[https://www.uniprot.org/uniprot/Q6D5X8_PECAS Q6D5X8_PECAS]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3CJL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pectobacterium_atrosepticum_scri1043 Pectobacterium atrosepticum scri1043]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJL OCA].
+
<jmolCheckbox>
-
[[Category: Pectobacterium atrosepticum scri1043]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cj/3cjl_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Domain of unknown function]]
+
</jmolCheckbox>
-
[[Category: Jcsg]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cjl ConSurf].
-
[[Category: Joint center for structural genomic]]
+
<div style="clear:both"></div>
-
[[Category: Protein structure initiative]]
+
__TOC__
-
[[Category: Psi-2]]
+
</StructureSection>
-
[[Category: Structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: Unknown function]]
+
[[Category: Pectobacterium atrosepticum SCRI1043]]
-
[[Category: Yp_050007 1]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 06:31:59 2008''
+

Current revision

Crystal structure of a protein of unknown function (eca1910) from pectobacterium atrosepticum scri1043 at 2.20 A resolution

PDB ID 3cjl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3cjl"
Personal tools