2ojh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:16, 21 November 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2ojh.png|left|200px]]
 
-
<!--
+
==The structure of putative TolB from Agrobacterium tumefaciens==
-
The line below this paragraph, containing "STRUCTURE_2ojh", creates the "Structure Box" on the page.
+
<StructureSection load='2ojh' size='340' side='right'caption='[[2ojh]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2ojh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OJH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OJH FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2ojh| PDB=2ojh | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ojh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ojh OCA], [https://pdbe.org/2ojh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ojh RCSB], [https://www.ebi.ac.uk/pdbsum/2ojh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ojh ProSAT], [https://www.topsan.org/Proteins/MCSG/2ojh TOPSAN]</span></td></tr>
-
 
+
</table>
-
===The structure of putative TolB from Agrobacterium tumefaciens===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Y1656_AGRFC Y1656_AGRFC]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2OJH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OJH OCA].
+
Check<jmol>
-
[[Category: Agrobacterium tumefaciens]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oj/2ojh_consurf.spt"</scriptWhenChecked>
-
[[Category: Cuff, M E.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Edwards, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Gu, J.]]
+
</jmolCheckbox>
-
[[Category: Joachimiak, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ojh ConSurf].
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: Savchenko, A.]]
+
__TOC__
-
[[Category: Xu, X.]]
+
</StructureSection>
-
[[Category: 6-stranded beta-propeller]]
+
[[Category: Agrobacterium fabrum str. C58]]
-
[[Category: Agrobacterium tumefacien]]
+
[[Category: Large Structures]]
-
[[Category: Mcsg]]
+
[[Category: Cuff ME]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Edwards A]]
-
[[Category: Protein structure initiative]]
+
[[Category: Gu J]]
-
[[Category: Psi-2]]
+
[[Category: Joachimiak A]]
-
[[Category: Structural genomic]]
+
[[Category: Savchenko A]]
-
[[Category: Tolb]]
+
[[Category: Xu X]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 07:22:15 2008''
+

Current revision

The structure of putative TolB from Agrobacterium tumefaciens

PDB ID 2ojh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ojh"
Personal tools