1syt
From Proteopedia
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(New page: 200px<br /><applet load="1syt" size="450" color="white" frame="true" align="right" spinBox="true" caption="1syt, resolution 2.6Å" /> '''Crystal structure of ...) |
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| - | [[Image:1syt.gif|left|200px]]<br /><applet load="1syt" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1syt, resolution 2.6Å" /> | ||
| - | '''Crystal structure of signalling protein from goat SPG-40 in the presense of N,N',N''-triacetyl-chitotriose at 2.6A resolution'''<br /> | ||
| - | == | + | ==Crystal structure of signalling protein from goat SPG-40 in the presense of N,N',N''-triacetyl-chitotriose at 2.6A resolution== |
| - | + | <StructureSection load='1syt' size='340' side='right'caption='[[1syt]], [[Resolution|resolution]] 2.60Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[1syt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SYT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SYT FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> |
| - | [ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1syt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1syt OCA], [https://pdbe.org/1syt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1syt RCSB], [https://www.ebi.ac.uk/pdbsum/1syt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1syt ProSAT]</span></td></tr> |
| - | + | </table> | |
| - | [ | + | == Function == |
| - | [[ | + | [https://www.uniprot.org/uniprot/CH3L1_CAPHI CH3L1_CAPHI] Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment. |
| - | [ | + | == Evolutionary Conservation == |
| - | [[ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | + | Check<jmol> | |
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sy/1syt_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1syt ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Chitinase-3-like protein 3D structures|Chitinase-3-like protein 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Capra hircus]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Kumar J]] | ||
| + | [[Category: Prem Kumar R]] | ||
| + | [[Category: Sharma S]] | ||
| + | [[Category: Singh TP]] | ||
| + | [[Category: Srivastava DB]] | ||
Current revision
Crystal structure of signalling protein from goat SPG-40 in the presense of N,N',N-triacetyl-chitotriose at 2.6A resolution
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