3dvu

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[[Image:3dvu.jpg|left|200px]]
 
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==Crystal structure of the complex of murine gamma-herpesvirus 68 Bcl-2 homolog M11 and the Beclin 1 BH3 domain==
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The line below this paragraph, containing "STRUCTURE_3dvu", creates the "Structure Box" on the page.
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<StructureSection load='3dvu' size='340' side='right'caption='[[3dvu]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3dvu]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Murid_gammaherpesvirus_4 Murid gammaherpesvirus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DVU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DVU FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dvu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dvu OCA], [https://pdbe.org/3dvu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dvu RCSB], [https://www.ebi.ac.uk/pdbsum/3dvu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dvu ProSAT]</span></td></tr>
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{{STRUCTURE_3dvu| PDB=3dvu | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ARBH_MHV68 ARBH_MHV68] Plays a role in the protection against apoptosis mediated by cytotoxic cells during the immune response to acute and persistent viral infection. Contributes therefore to latency establishment. Plays also a role in the inhibition of host starvation-induced autophagy which ultimately contributes to the viral chronic infection.<ref>PMID:10573168</ref> <ref>PMID:11205127</ref> <ref>PMID:15604429</ref> <ref>PMID:18248095</ref> <ref>PMID:18797192</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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gamma-Herpesviruses (gammaHVs), including important human pathogens such as Epstein Barr virus, Kaposi's sarcoma-associated HV, and the murine gammaHV68, encode homologs of the antiapoptotic, cellular Bcl-2 (cBcl-2) to promote viral replication and pathogenesis. The precise molecular details by which these proteins function in viral infection are poorly understood. Autophagy, a lysosomal degradation pathway, is inhibited by the interaction of cBcl-2s with a key autophagy effector, Beclin 1, and can also be inhibited by gammaHV Bcl-2s. Here we investigate the gammaHV68 M11-Beclin 1 interaction in atomic detail, using biochemical and structural approaches. We show that the Beclin 1 BH3 domain is the primary determinant of binding to M11 and other Bcl-2s, and this domain binds in a hydrophobic groove on M11, reminiscent of the binding of different BH3 domains to other Bcl-2s. Unexpectedly, regions outside of, but contiguous with, the Beclin 1 BH3 domain also contribute to this interaction. We find that M11 binds to Beclin 1 more strongly than do KSHV Bcl-2 or cBcl-2. Further, the differential affinity of M11 for different BH3 domains is caused by subtle, yet significant, variations in the atomic details of each interaction. Consistent with our structural analysis, we find that Beclin 1 residues L116 and F123, and M11 residue pairs G86 + R87 and Y60 + L74, are required for M11 to bind to Beclin 1 and downregulate autophagy. Thus, our results suggest that M11 inhibits autophagy through a mechanism that involves the binding of the Beclin 1 BH3 domain in the M11 hydrophobic surface groove.
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===Crystal structure of the complex of murine gamma-herpesvirus 68 Bcl-2 homolog M11 and the Beclin 1 BH3 domain===
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Molecular basis of the regulation of Beclin 1-dependent autophagy by the gamma-herpesvirus 68 Bcl-2 homolog M11.,Sinha S, Colbert CL, Becker N, Wei Y, Levine B Autophagy. 2008 Nov 18;4(8). PMID:18797192<ref>PMID:18797192</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3dvu" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[B-cell lymphoma proteins 3D structures|B-cell lymphoma proteins 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 18797192 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_18797192}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Homo sapiens]]
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3DVU is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Murid_herpesvirus_4 Murid herpesvirus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DVU OCA].
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[[Category: Large Structures]]
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[[Category: Murid gammaherpesvirus 4]]
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==Reference==
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[[Category: Sinha S]]
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Molecular basis of the regulation of Beclin 1-dependent autophagy by the gamma-herpesvirus 68 Bcl-2 homolog M11., Sinha S, Colbert CL, Becker N, Wei Y, Levine B, Autophagy. 2008 Nov 18;4(8). PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18797192 18797192]
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[[Category: Murid herpesvirus 4]]
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[[Category: Protein complex]]
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[[Category: Sinha, S.]]
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[[Category: Antiviral defense]]
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[[Category: Apoptosis]]
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[[Category: Autophagy]]
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[[Category: Beclin 1]]
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[[Category: Bh3 domain]]
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[[Category: Coiled coil]]
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[[Category: Cytoplasm]]
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[[Category: Golgi apparatus]]
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[[Category: M11]]
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[[Category: Membrane]]
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[[Category: Polymorphism]]
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[[Category: Protein-protein complex]]
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[[Category: Viral bcl-2]]
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[[Category: Viral protein/apoptosis complex]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 8 09:30:59 2008''
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Current revision

Crystal structure of the complex of murine gamma-herpesvirus 68 Bcl-2 homolog M11 and the Beclin 1 BH3 domain

PDB ID 3dvu

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