This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3de9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:41, 21 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3de9 is ON HOLD until Paper Publication
+
==Crystal Structure of a Trimeric Cytochrome cb562 Assembly Induced by Nickel Coordination==
 +
<StructureSection load='3de9' size='340' side='right'caption='[[3de9]], [[Resolution|resolution]] 2.04&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3de9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DE9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DE9 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.04&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3de9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3de9 OCA], [https://pdbe.org/3de9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3de9 RCSB], [https://www.ebi.ac.uk/pdbsum/3de9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3de9 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/C562_ECOLX C562_ECOLX] Electron-transport protein of unknown function.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/de/3de9_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3de9 ConSurf].
 +
<div style="clear:both"></div>
-
Authors: Salgado, E.N., Lewis, R.A., Rheingold, A.L., Tezcan, F.A.
+
==See Also==
-
 
+
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
-
Description: Crystal Structure of a Trimeric Cytochrome cb562 Assembly Induced by Nickel Coordination
+
*[[Cytochrome b5 3D structures|Cytochrome b5 3D structures]]
-
 
+
__TOC__
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 15 14:03:54 2008''
+
</StructureSection>
 +
[[Category: Escherichia coli]]
 +
[[Category: Large Structures]]
 +
[[Category: Lewis RA]]
 +
[[Category: Rheingold AL]]
 +
[[Category: Salgado EN]]
 +
[[Category: Tezcan FA]]

Current revision

Crystal Structure of a Trimeric Cytochrome cb562 Assembly Induced by Nickel Coordination

PDB ID 3de9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools