Template:STRUCTURE 2d9e
From Proteopedia
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| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2d9e, [[NMR_Ensembles_of_Models | 20 NMR models]] (<scene name='initialview01'>default scene</scene>)}}} | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2d9e]], [[NMR_Ensembles_of_Models | 20 NMR models]] (<scene name='initialview01'>default scene</scene>)}}} |
|GENE= BRPF1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | |GENE= BRPF1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | ||
| - | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d9e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d9e OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2d9e RCSB], [http://www.ebi.ac.uk/pdbsum/2d9e PDBsum], [http://www.topsan.org/Proteins/RSGI/2d9e TOPSAN]</span> | |
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d9e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d9e OCA], [http://www. | + | |
|FUNCTION={{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0003677 | text = DNA binding}} | |FUNCTION={{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0003677 | text = DNA binding}} | ||
|PROCESS={{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0006350 | text = transcription}} | |PROCESS={{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0006350 | text = transcription}} | ||
|COMPONENT={{GO|id=GO:0005622 | text = intracellular}}{{GO|id=GO:0005634 | text = nucleus}} | |COMPONENT={{GO|id=GO:0005622 | text = intracellular}}{{GO|id=GO:0005634 | text = nucleus}} | ||
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007087 Ipr007087], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013083 Ipr013083], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000313 Ipr000313], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011011 Ipr011011], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015880 Ipr015880], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001965 Ipr001965], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001487 Ipr001487]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00439 PF00439]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P55201 P55201]</span> | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007087 Ipr007087], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013083 Ipr013083], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000313 Ipr000313], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011011 Ipr011011], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015880 Ipr015880], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001965 Ipr001965], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001487 Ipr001487]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00439 PF00439]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P55201 P55201]</span> | ||
| - | | | + | |uPDB=2D9E|CONSURF={{!}}- |
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_2d9e_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
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| 2d9e, 20 NMR models () | |||||||||
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| Gene: | BRPF1 (Homo sapiens) | ||||||||
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| Resources: | FirstGlance, OCA, RCSB, PDBsum, TOPSAN | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
