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Template:STRUCTURE 2d9e

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Current revision (10:39, 6 January 2013) (edit) (undo)
 
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{{StructureD
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{{Structure
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|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2d9e, [[NMR_Ensembles_of_Models | 20 NMR models]] (<scene name='initialview01'>default scene</scene>)}}}
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|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2d9e]], [[NMR_Ensembles_of_Models | 20 NMR models]] (<scene name='initialview01'>default scene</scene>)}}}
|GENE= BRPF1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
|GENE= BRPF1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00297 BROMO]</span>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d9e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d9e OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2d9e RCSB], [http://www.ebi.ac.uk/pdbsum/2d9e PDBsum], [http://www.topsan.org/Proteins/RSGI/2d9e TOPSAN]</span>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d9e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d9e OCA], [http://www.ebi.ac.uk/pdbsum/2d9e PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2d9e RCSB], [http://www.topsan.org/Proteins/RSGI/2d9e TOPSAN]</span>
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|FUNCTION={{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0003677 | text = DNA binding}}
|FUNCTION={{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0003677 | text = DNA binding}}
|PROCESS={{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0006350 | text = transcription}}
|PROCESS={{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0006350 | text = transcription}}
|COMPONENT={{GO|id=GO:0005622 | text = intracellular}}{{GO|id=GO:0005634 | text = nucleus}}
|COMPONENT={{GO|id=GO:0005622 | text = intracellular}}{{GO|id=GO:0005634 | text = nucleus}}
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007087 Ipr007087], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013083 Ipr013083], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000313 Ipr000313], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011011 Ipr011011], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015880 Ipr015880], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001965 Ipr001965], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001487 Ipr001487]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00439 PF00439]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P55201 P55201]</span>
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007087 Ipr007087], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013083 Ipr013083], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000313 Ipr000313], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011011 Ipr011011], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015880 Ipr015880], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001965 Ipr001965], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001487 Ipr001487]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00439 PF00439]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P55201 P55201]</span>
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|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=BRPF1 BRPF1]</span>
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|uPDB=2D9E|CONSURF={{!}}-
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{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
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{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
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{{!}} '''Toggle Conservation Colors:'''
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{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
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Rows = identical sequences:
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<jmol>
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<jmolButton>
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<script></script>
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<text>A [x]</text>
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<name>jmb_2d9e_A</name>
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<title>toggle chain A</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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}}
}}

Current revision

Drag the structure with the mouse to rotate
2d9e, 20 NMR models ()
Gene: BRPF1 (Homo sapiens)
Resources: FirstGlance, OCA, RCSB, PDBsum, TOPSAN
Coordinates: save as pdb, mmCIF, xml


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