1to6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1to6" size="450" color="white" frame="true" align="right" spinBox="true" caption="1to6, resolution 2.50&Aring;" /> '''Glycerate kinase fro...)
Current revision (08:40, 14 February 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1to6.gif|left|200px]]<br /><applet load="1to6" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1to6, resolution 2.50&Aring;" />
 
-
'''Glycerate kinase from Neisseria meningitidis (serogroup A)'''<br />
 
-
==About this Structure==
+
==Glycerate kinase from Neisseria meningitidis (serogroup A)==
-
1TO6 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis_serogroup_a Neisseria meningitidis serogroup a] with SO4 as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Glycerate_kinase Glycerate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.31 2.7.1.31] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1TO6 OCA].
+
<StructureSection load='1to6' size='340' side='right'caption='[[1to6]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
[[Category: Glycerate kinase]]
+
== Structural highlights ==
-
[[Category: Neisseria meningitidis serogroup a]]
+
<table><tr><td colspan='2'>[[1to6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_serogroup_A Neisseria meningitidis serogroup A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TO6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TO6 FirstGlance]. <br>
-
[[Category: Single protein]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
[[Category: Burley, S.K.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[Category: Kniewel, R.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1to6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1to6 OCA], [https://pdbe.org/1to6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1to6 RCSB], [https://www.ebi.ac.uk/pdbsum/1to6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1to6 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1to6 TOPSAN]</span></td></tr>
-
[[Category: Lima, C.D.]]
+
</table>
-
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
+
== Function ==
-
[[Category: Rajashankar, K.R.]]
+
[https://www.uniprot.org/uniprot/GLXK_NEIMA GLXK_NEIMA]
-
[[Category: Solorzano, V.]]
+
== Evolutionary Conservation ==
-
[[Category: SO4]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: glycerate metabolism]]
+
Check<jmol>
-
[[Category: new york structural genomix research consortium]]
+
<jmolCheckbox>
-
[[Category: nysgxrc]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/to/1to6_consurf.spt"</scriptWhenChecked>
-
[[Category: protein structure initiative]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: psi]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: structural genomics t831]]
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1to6 ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 03:27:29 2007''
+
==See Also==
 +
*[[Glycerate kinase|Glycerate kinase]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Neisseria meningitidis serogroup A]]
 +
[[Category: Burley SK]]
 +
[[Category: Kniewel R]]
 +
[[Category: Lima CD]]
 +
[[Category: Rajashankar KR]]
 +
[[Category: Solorzano V]]

Current revision

Glycerate kinase from Neisseria meningitidis (serogroup A)

PDB ID 1to6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools