2jui

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:48, 20 December 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2jui.png|left|200px]]
 
-
<!--
+
==Three-Dimensional Structure of the two Peptides that Constitute the Two-Peptide Bacteriocin Plantaracin EF==
-
The line below this paragraph, containing "STRUCTURE_2jui", creates the "Structure Box" on the page.
+
<StructureSection load='2jui' size='340' side='right'caption='[[2jui]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2jui]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_plantarum Lactiplantibacillus plantarum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JUI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JUI FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jui FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jui OCA], [https://pdbe.org/2jui PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jui RCSB], [https://www.ebi.ac.uk/pdbsum/2jui PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jui ProSAT]</span></td></tr>
-
{{STRUCTURE_2jui| PDB=2jui | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/P71470_LACPN P71470_LACPN]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The three-dimensional structures of the two peptides plantaricin E (plnE; 33 residues) and plantaricin F (plnF; 34 residues) constituting the two-peptide bacteriocin plantaricin EF (plnEF) have been determined by nuclear magnetic resonance (NMR) spectroscopy in the presence of DPC micelles. PlnE has an N-terminal alpha-helix (residues 10-21), and a C-terminal alpha-helix-like structure (residues 25-31). PlnF has a long central alpha-helix (residues 7-32) with a kink of 38+/-7 degrees at Pro20. There is some flexibility in the helix in the kink region. Both helices in plnE are amphiphilic, while the helix in plnF is polar in its N-terminal half and amphiphilic in its C-terminal half. The alpha-helical content obtained by NMR spectroscopy is in agreement with CD studies. PlnE has two GxxxG motifs which are putative helix-helix interaction motifs, one at residues 5 to 9 and one at residues 20 to 24, while plnF has one such motif at residues 30 to 34. The peptides are flexible in these GxxxG regions. It is suggested that the two peptides lie parallel in a staggered fashion relative to each other and interact through helix-helix interactions involving the GxxxG motifs.
-
===Three-Dimensional Structure of the two Peptides that Constitute the Two-Peptide Bacteriocin Plantaracin EF===
+
Three-dimensional structure of the two peptides that constitute the two-peptide bacteriocin plantaricin EF.,Fimland N, Rogne P, Fimland G, Nissen-Meyer J, Kristiansen PE Biochim Biophys Acta. 2008 May 24;. PMID:18555030<ref>PMID:18555030</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_18555030}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 2jui" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 18555030 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_18555030}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Lactiplantibacillus plantarum]]
-
2JUI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Lactobacillus_plantarum Lactobacillus plantarum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JUI OCA].
+
[[Category: Large Structures]]
-
 
+
[[Category: Fimland G]]
-
==Reference==
+
[[Category: Fimland N]]
-
Three-dimensional structure of the two peptides that constitute the two-peptide bacteriocin plantaricin EF., Fimland N, Rogne P, Fimland G, Nissen-Meyer J, Kristiansen PE, Biochim Biophys Acta. 2008 May 24;. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18555030 18555030]
+
[[Category: Kristiansen P]]
-
[[Category: Lactobacillus plantarum]]
+
[[Category: Nissen-Meyer J]]
-
[[Category: Single protein]]
+
[[Category: Rogne P]]
-
[[Category: Fimland, G.]]
+
-
[[Category: Fimland, N.]]
+
-
[[Category: Kristiansen, P.]]
+
-
[[Category: Nissen-Meyer, J.]]
+
-
[[Category: Rogne, P.]]
+
-
[[Category: Ampiphilic alpha helix]]
+
-
[[Category: Toxin]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 12 20:29:19 2008''
+

Current revision

Three-Dimensional Structure of the two Peptides that Constitute the Two-Peptide Bacteriocin Plantaracin EF

PDB ID 2jui

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2jui"
Personal tools