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3di4

From Proteopedia

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{{Seed}}
 
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[[Image:3di4.png|left|200px]]
 
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==Crystal structure of a duf1989 family protein (spo0365) from silicibacter pomeroyi dss-3 at 1.60 A resolution==
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The line below this paragraph, containing "STRUCTURE_3di4", creates the "Structure Box" on the page.
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<StructureSection load='3di4' size='340' side='right'caption='[[3di4]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3di4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruegeria_pomeroyi_DSS-3 Ruegeria pomeroyi DSS-3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DI4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DI4 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3di4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3di4 OCA], [https://pdbe.org/3di4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3di4 RCSB], [https://www.ebi.ac.uk/pdbsum/3di4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3di4 ProSAT], [https://www.topsan.org/Proteins/JCSG/3di4 TOPSAN]</span></td></tr>
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{{STRUCTURE_3di4| PDB=3di4 | SCENE= }}
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</table>
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== Function ==
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===Crystal structure of protein of unknown function (DUF1989) (YP_165628.1) from SILICIBACTER POMEROYI DSS-3 at 1.60 A resolution===
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[https://www.uniprot.org/uniprot/Q5LXE3_RUEPO Q5LXE3_RUEPO]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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3DI4 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DI4 OCA].
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<jmolCheckbox>
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[[Category: Bacteria]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/di/3di4_consurf.spt"</scriptWhenChecked>
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[[Category: JCSG, Joint Center for Structural Genomics.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Jcsg]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Joint center for structural genomic]]
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</jmolCheckbox>
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[[Category: Protein structure initiative]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3di4 ConSurf].
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[[Category: Psi-2]]
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<div style="clear:both"></div>
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[[Category: Structural genomic]]
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__TOC__
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[[Category: Unknown function]]
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</StructureSection>
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[[Category: Yp_165628 1]]
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[[Category: Large Structures]]
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[[Category: Ruegeria pomeroyi DSS-3]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 09:53:36 2008''
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Current revision

Crystal structure of a duf1989 family protein (spo0365) from silicibacter pomeroyi dss-3 at 1.60 A resolution

PDB ID 3di4

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