2nr7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:21, 30 October 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2nr7.png|left|200px]]
 
-
<!--
+
==Structural Genomics, the crystal structure of putative secretion activator protein from Porphyromonas gingivalis W83==
-
The line below this paragraph, containing "STRUCTURE_2nr7", creates the "Structure Box" on the page.
+
<StructureSection load='2nr7' size='340' side='right'caption='[[2nr7]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2nr7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis_W83 Porphyromonas gingivalis W83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NR7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NR7 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2nr7| PDB=2nr7 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nr7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nr7 OCA], [https://pdbe.org/2nr7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nr7 RCSB], [https://www.ebi.ac.uk/pdbsum/2nr7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nr7 ProSAT], [https://www.topsan.org/Proteins/MCSG/2nr7 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Structural Genomics, the crystal structure of putative secretion activator protein from Porphyromonas gingivalis W83===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q7MXB3_PORGI Q7MXB3_PORGI]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2NR7 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NR7 OCA].
+
Check<jmol>
-
[[Category: Porphyromonas gingivalis]]
+
<jmolCheckbox>
-
[[Category: Bigelow, L.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nr/2nr7_consurf.spt"</scriptWhenChecked>
-
[[Category: Gu, M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Joachimiak, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmolCheckbox>
-
[[Category: Tan, K.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nr7 ConSurf].
-
[[Category: Apcc85792]]
+
<div style="clear:both"></div>
-
[[Category: Mcsg]]
+
__TOC__
-
[[Category: Midwest center for structural genomic]]
+
</StructureSection>
-
[[Category: Porphyromonas gingivalis w83]]
+
[[Category: Large Structures]]
-
[[Category: Protein structure initiative]]
+
[[Category: Porphyromonas gingivalis W83]]
-
[[Category: Psi-2]]
+
[[Category: Bigelow L]]
-
[[Category: Secretion activator]]
+
[[Category: Gu M]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
 
+
[[Category: Tan K]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 10:45:47 2008''
+

Current revision

Structural Genomics, the crystal structure of putative secretion activator protein from Porphyromonas gingivalis W83

PDB ID 2nr7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2nr7"
Personal tools