3e23

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:13, 9 February 2022) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3e23.png|left|200px]]
 
-
<!--
+
==Crystal structure of the RPA2492 protein in complex with SAM from Rhodopseudomonas palustris, Northeast Structural Genomics Consortium Target RpR299==
-
The line below this paragraph, containing "STRUCTURE_3e23", creates the "Structure Box" on the page.
+
<StructureSection load='3e23' size='340' side='right'caption='[[3e23]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3e23]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"rhodobacillus_palustris"_molisch_1907 "rhodobacillus palustris" molisch 1907]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E23 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E23 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
-->
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3e23| PDB=3e23 | SCENE= }}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RPA2492 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1076 "Rhodobacillus palustris" Molisch 1907])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e23 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e23 OCA], [https://pdbe.org/3e23 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e23 RCSB], [https://www.ebi.ac.uk/pdbsum/3e23 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e23 ProSAT], [https://www.topsan.org/Proteins/NESGC/3e23 TOPSAN]</span></td></tr>
-
===Crystal structure of the RPA2492 protein in complex with SAM from Rhodopseudomonas palustris, Northeast Structural Genomics Consortium Target RpR299===
+
</table>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3E23 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E23 OCA].
+
<jmolCheckbox>
-
[[Category: Rhodopseudomonas palustris]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e2/3e23_consurf.spt"</scriptWhenChecked>
-
[[Category: Acton, T B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Chen, Y.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Ciccosanti, C.]]
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e23 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Rhodobacillus palustris molisch 1907]]
 +
[[Category: Large Structures]]
 +
[[Category: Acton, T B]]
 +
[[Category: Chen, Y]]
 +
[[Category: Ciccosanti, C]]
[[Category: Everett, J K]]
[[Category: Everett, J K]]
-
[[Category: Foote, E L.]]
+
[[Category: Foote, E L]]
-
[[Category: Forouhar, F.]]
+
[[Category: Forouhar, F]]
-
[[Category: Hunt, J F.]]
+
[[Category: Hunt, J F]]
-
[[Category: Mao, L.]]
+
[[Category: Mao, L]]
-
[[Category: Montelione, G T.]]
+
[[Category: Montelione, G T]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Structural genomic]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Seetharaman, J]]
-
[[Category: Tong, L.]]
+
[[Category: Tong, L]]
-
[[Category: Tong, S.]]
+
[[Category: Tong, S]]
-
[[Category: Wang, H.]]
+
[[Category: Wang, H]]
-
[[Category: Xiao, R.]]
+
[[Category: Xiao, R]]
[[Category: Alpha-beta protein]]
[[Category: Alpha-beta protein]]
[[Category: Nesg]]
[[Category: Nesg]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
[[Category: Unknown function]]
[[Category: Unknown function]]
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 10:52:52 2008''
 

Current revision

Crystal structure of the RPA2492 protein in complex with SAM from Rhodopseudomonas palustris, Northeast Structural Genomics Consortium Target RpR299

PDB ID 3e23

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools