3bru

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:53, 9 October 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3bru.png|left|200px]]
 
-
<!--
+
==Crystal structure of regulatory protein TetR from Rhodobacter sphaeroides==
-
The line below this paragraph, containing "STRUCTURE_3bru", creates the "Structure Box" on the page.
+
<StructureSection load='3bru' size='340' side='right'caption='[[3bru]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3bru]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides_2.4.1 Cereibacter sphaeroides 2.4.1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BRU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BRU FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3bru| PDB=3bru | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bru FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bru OCA], [https://pdbe.org/3bru PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bru RCSB], [https://www.ebi.ac.uk/pdbsum/3bru PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bru ProSAT], [https://www.topsan.org/Proteins/MCSG/3bru TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ACUR_CERS4 ACUR_CERS4] A transcriptional repressor for its operon. Probably binds to 2 operator sequences in the promoter.<ref>PMID:21249136</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/br/3bru_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bru ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of regulatory protein TetR from Rhodobacter sphaeroides===
+
==See Also==
-
 
+
*[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]]
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
3BRU is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides_2.4.1 Rhodobacter sphaeroides 2.4.1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BRU OCA].
+
__TOC__
-
[[Category: Rhodobacter sphaeroides 2 4.1]]
+
</StructureSection>
-
[[Category: Freeman, L.]]
+
[[Category: Cereibacter sphaeroides 2 4.1]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Large Structures]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Freeman L]]
-
[[Category: Maltseva, N.]]
+
[[Category: Joachimiak A]]
-
[[Category: Osipiuk, J.]]
+
[[Category: Maltseva N]]
-
[[Category: Apc88928]]
+
[[Category: Osipiuk J]]
-
[[Category: Dna-binding]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Tetr]]
+
-
[[Category: Transcription]]
+
-
[[Category: Transcription regulation]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 10:57:02 2008''
+

Current revision

Crystal structure of regulatory protein TetR from Rhodobacter sphaeroides

PDB ID 3bru

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools