2jz5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:43, 9 May 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2jz5.png|left|200px]]
 
-
<!--
+
==NMR solution structure of protein VPA0419 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR68==
-
The line below this paragraph, containing "STRUCTURE_2jz5", creates the "Structure Box" on the page.
+
<StructureSection load='2jz5' size='340' side='right'caption='[[2jz5]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2jz5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JZ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JZ5 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jz5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jz5 OCA], [https://pdbe.org/2jz5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jz5 RCSB], [https://www.ebi.ac.uk/pdbsum/2jz5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jz5 ProSAT], [https://www.topsan.org/Proteins/NESGC/2jz5 TOPSAN]</span></td></tr>
-
{{STRUCTURE_2jz5| PDB=2jz5 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===NMR solution structure of protein VPA0419 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR68===
+
[https://www.uniprot.org/uniprot/Q87J34_VIBPA Q87J34_VIBPA]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2JZ5 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_rimd_2210633 Vibrio parahaemolyticus rimd 2210633]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JZ5 OCA].
+
<jmolCheckbox>
-
[[Category: Vibrio parahaemolyticus rimd 2210633]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jz/2jz5_consurf.spt"</scriptWhenChecked>
-
[[Category: Acton, T B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Baran, M C.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Eletski, A.]]
+
</jmolCheckbox>
-
[[Category: Jiang, M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jz5 ConSurf].
-
[[Category: Liu, J.]]
+
<div style="clear:both"></div>
-
[[Category: Maglaqui, M.]]
+
__TOC__
-
[[Category: Montelione, G T.]]
+
</StructureSection>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Large Structures]]
-
[[Category: Parish, D.]]
+
[[Category: Vibrio parahaemolyticus RIMD 2210633]]
-
[[Category: Rost, B.]]
+
[[Category: Acton T]]
-
[[Category: Singarapu, K K.]]
+
[[Category: Baran MC]]
-
[[Category: Sukumaran, D K.]]
+
[[Category: Eletski A]]
-
[[Category: Swapna, G.]]
+
[[Category: Jiang M]]
-
[[Category: Szyperski, T.]]
+
[[Category: Liu J]]
-
[[Category: Xiao, R.]]
+
[[Category: Maglaqui M]]
-
[[Category: Zhao, L.]]
+
[[Category: Montelione GT]]
-
[[Category: Gft nmr]]
+
[[Category: Parish D]]
-
[[Category: Nesg]]
+
[[Category: Rost B]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Singarapu KK]]
-
[[Category: Protein structure]]
+
[[Category: Sukumaran DK]]
-
[[Category: Protein structure initiative]]
+
[[Category: Swapna G]]
-
[[Category: Psi-2]]
+
[[Category: Szyperski T]]
-
[[Category: Structural genomic]]
+
[[Category: Xiao R]]
-
[[Category: Unknown function]]
+
[[Category: Zhao L]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 11:21:58 2008''
+

Current revision

NMR solution structure of protein VPA0419 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR68

PDB ID 2jz5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2jz5"
Personal tools