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3dc7

From Proteopedia

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{{Seed}}
 
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[[Image:3dc7.png|left|200px]]
 
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==Crystal structure of the protein Q88SR8 from Lactobacillus plantarum. Northeast Structural Genomics consortium target LpR109.==
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The line below this paragraph, containing "STRUCTURE_3dc7", creates the "Structure Box" on the page.
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<StructureSection load='3dc7' size='340' side='right'caption='[[3dc7]], [[Resolution|resolution]] 2.12&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3dc7]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_plantarum Lactobacillus plantarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DC7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DC7 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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-->
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3dc7| PDB=3dc7 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dc7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dc7 OCA], [https://pdbe.org/3dc7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dc7 RCSB], [https://www.ebi.ac.uk/pdbsum/3dc7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dc7 ProSAT], [https://www.topsan.org/Proteins/NESGC/3dc7 TOPSAN]</span></td></tr>
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</table>
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===Crystal structure of the protein Q88SR8 from Lactobacillus plantarum. Northeast Structural Genomics consortium target LpR109.===
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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==About this Structure==
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<jmolCheckbox>
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3DC7 is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Lactobacillus_plantarum Lactobacillus plantarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DC7 OCA].
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dc7_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dc7 ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Lactobacillus plantarum]]
[[Category: Lactobacillus plantarum]]
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[[Category: Abashidze, M.]]
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[[Category: Large Structures]]
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[[Category: Acton, T B.]]
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[[Category: Abashidze, M]]
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[[Category: Baran, M C.]]
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[[Category: Acton, T B]]
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[[Category: Ciccosanti, C.]]
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[[Category: Baran, M C]]
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[[Category: Hunt, J F.]]
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[[Category: Ciccosanti, C]]
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[[Category: Kuzin, A P.]]
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[[Category: Hunt, J F]]
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[[Category: Mao, L.]]
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[[Category: Kuzin, A P]]
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[[Category: Montelione, G T.]]
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[[Category: Mao, L]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Montelione, G T]]
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[[Category: Nair, R.]]
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[[Category: Structural genomic]]
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[[Category: Rost, B.]]
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[[Category: Nair, R]]
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[[Category: Seetharaman, J.]]
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[[Category: Rost, B]]
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[[Category: Tong, L.]]
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[[Category: Seetharaman, J]]
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[[Category: Vorobiev, S M.]]
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[[Category: Tong, L]]
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[[Category: Xiao, R.]]
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[[Category: Vorobiev, S M]]
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[[Category: Zhao, L.]]
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[[Category: Xiao, R]]
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[[Category: Zhao, L]]
[[Category: Nesg lpr109 x-ray lp_3323]]
[[Category: Nesg lpr109 x-ray lp_3323]]
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[[Category: Northeast structural genomics consortium]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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[[Category: Unknown function]]
[[Category: Unknown function]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 12:13:39 2008''
 

Current revision

Crystal structure of the protein Q88SR8 from Lactobacillus plantarum. Northeast Structural Genomics consortium target LpR109.

PDB ID 3dc7

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OCA

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