1o1x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:39, 25 January 2023) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1o1x.png|left|200px]]
 
-
<!--
+
==Crystal structure of a ribose 5-phosphate isomerase rpib (tm1080) from thermotoga maritima at 1.90 A resolution==
-
The line below this paragraph, containing "STRUCTURE_1o1x", creates the "Structure Box" on the page.
+
<StructureSection load='1o1x' size='340' side='right'caption='[[1o1x]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1o1x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O1X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1O1X FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1o1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o1x OCA], [https://pdbe.org/1o1x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1o1x RCSB], [https://www.ebi.ac.uk/pdbsum/1o1x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1o1x ProSAT], [https://www.topsan.org/Proteins/JCSG/1o1x TOPSAN]</span></td></tr>
-
{{STRUCTURE_1o1x| PDB=1o1x | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9X0G9_THEMA Q9X0G9_THEMA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o1/1o1x_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1o1x ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of ribose-5-phosphate isomerase RpiB (TM1080) from Thermotoga maritima at 1.90 A resolution===
+
==See Also==
-
 
+
*[[Ribose-5-phosphate isomerase 3D structures|Ribose-5-phosphate isomerase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1O1X is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O1X OCA].
+
[[Category: Large Structures]]
-
 
+
-
==Reference==
+
-
Crystal structure of a ribose-5-phosphate isomerase RpiB (TM1080) from Thermotoga maritima at 1.90 A resolution., Xu Q, Schwarzenbacher R, McMullan D, von Delft F, Brinen LS, Canaves JM, Dai X, Deacon AM, Elsliger MA, Eshagi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Jaroszewski L, Karlak C, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, Levin I, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Quijano K, Robb A, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA, Proteins. 2004 Jul 1;56(1):171-5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15162497 15162497]
+
-
[[Category: Ribose-5-phosphate isomerase]]
+
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
 
-
[[Category: Jcsg]]
 
-
[[Category: Joint center for structural genomic]]
 
-
[[Category: Protein structure initiative]]
 
-
[[Category: Psi]]
 
-
[[Category: Ribose-5-phosphate isomerase rpib]]
 
-
[[Category: Structural genomic]]
 
-
[[Category: Tm1080]]
 
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 12:25:23 2008''
 

Current revision

Crystal structure of a ribose 5-phosphate isomerase rpib (tm1080) from thermotoga maritima at 1.90 A resolution

PDB ID 1o1x

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1o1x"
Personal tools