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3d3u

From Proteopedia

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{{Seed}}
 
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[[Image:3d3u.png|left|200px]]
 
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==Crystal structure of 4-hydroxybutyrate CoA-transferase (abfT-2) from Porphyromonas gingivalis. Northeast Structural Genomics Consortium target PgR26==
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The line below this paragraph, containing "STRUCTURE_3d3u", creates the "Structure Box" on the page.
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<StructureSection load='3d3u' size='340' side='right'caption='[[3d3u]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3d3u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Porgi Porgi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D3U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D3U FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">abfT-2, PG_1956 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=242619 PORGI])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d3u OCA], [https://pdbe.org/3d3u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d3u RCSB], [https://www.ebi.ac.uk/pdbsum/3d3u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d3u ProSAT], [https://www.topsan.org/Proteins/NESGC/3d3u TOPSAN]</span></td></tr>
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{{STRUCTURE_3d3u| PDB=3d3u | SCENE= }}
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</table>
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== Evolutionary Conservation ==
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===Crystal structure of 4-hydroxybutyrate CoA-transferase (abfT-2) from Porphyromonas gingivalis. Northeast Structural Genomics Consortium target PgR26===
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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==About this Structure==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d3/3d3u_consurf.spt"</scriptWhenChecked>
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3D3U is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis_w83 Porphyromonas gingivalis w83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D3U OCA].
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Porphyromonas gingivalis w83]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Acton, T B.]]
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</jmolCheckbox>
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[[Category: Conover, K.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d3u ConSurf].
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[[Category: Cunningham, K.]]
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<div style="clear:both"></div>
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[[Category: Everett, J K.]]
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__TOC__
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[[Category: Forouhar, F.]]
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</StructureSection>
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[[Category: Ho, C K.]]
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[[Category: Large Structures]]
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[[Category: Hunt, J F.]]
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[[Category: Porgi]]
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[[Category: Hussain, M.]]
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[[Category: Acton, T B]]
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[[Category: II, W N.Price.]]
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[[Category: Conover, K]]
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[[Category: Ma, L-C.]]
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[[Category: Cunningham, K]]
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[[Category: Montelione, G T.]]
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[[Category: Everett, J K]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Forouhar, F]]
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[[Category: Neely, H.]]
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[[Category: Ho, C K]]
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[[Category: Seetharaman, J.]]
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[[Category: Hunt, J F]]
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[[Category: Tong, L.]]
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[[Category: Hussain, M]]
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[[Category: Xiao, R.]]
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[[Category: II, W N.Price]]
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[[Category: Zhang, X-Z.]]
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[[Category: Ma, L C]]
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[[Category: Montelione, G T]]
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[[Category: Structural genomic]]
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[[Category: Neely, H]]
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[[Category: Seetharaman, J]]
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[[Category: Tong, L]]
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[[Category: Xiao, R]]
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[[Category: Zhang, X Z]]
[[Category: Alpha-beta protein]]
[[Category: Alpha-beta protein]]
[[Category: Nesg]]
[[Category: Nesg]]
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[[Category: Northeast structural genomics consortium]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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[[Category: Transferase]]
[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 12:52:43 2008''
 

Current revision

Crystal structure of 4-hydroxybutyrate CoA-transferase (abfT-2) from Porphyromonas gingivalis. Northeast Structural Genomics Consortium target PgR26

PDB ID 3d3u

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