2p12

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:18, 21 November 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2p12.png|left|200px]]
 
-
<!--
+
==Crystal structure of protein of unknown function DUF402 from Rhodococcus sp. RHA1==
-
The line below this paragraph, containing "STRUCTURE_2p12", creates the "Structure Box" on the page.
+
<StructureSection load='2p12' size='340' side='right'caption='[[2p12]], [[Resolution|resolution]] 1.63&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2p12]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_jostii_RHA1 Rhodococcus jostii RHA1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P12 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P12 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.63&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2p12| PDB=2p12 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p12 OCA], [https://pdbe.org/2p12 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p12 RCSB], [https://www.ebi.ac.uk/pdbsum/2p12 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p12 ProSAT], [https://www.topsan.org/Proteins/MCSG/2p12 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of protein of unknown function DUF402 from Rhodococcus sp. RHA1===
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2P12 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Rhodococcus_sp. Rhodococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P12 OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p1/2p12_consurf.spt"</scriptWhenChecked>
-
[[Category: Rhodococcus sp.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Edwards, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Evdokimova, E.]]
+
</jmolCheckbox>
-
[[Category: Joachimiak, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p12 ConSurf].
-
[[Category: Kim, Y.]]
+
<div style="clear:both"></div>
-
[[Category: Kudritska, M.]]
+
__TOC__
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</StructureSection>
-
[[Category: Savchenko, A.]]
+
[[Category: Large Structures]]
-
[[Category: Apc7392]]
+
[[Category: Rhodococcus jostii RHA1]]
-
[[Category: Beta-barrel]]
+
[[Category: Edwards A]]
-
[[Category: Mcsg]]
+
[[Category: Evdokimova E]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Protein structure initiative]]
+
[[Category: Kim Y]]
-
[[Category: Psi-2]]
+
[[Category: Kudritska M]]
-
[[Category: Rhodococcus sp. rha1]]
+
[[Category: Savchenko A]]
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 13:04:50 2008''
+

Current revision

Crystal structure of protein of unknown function DUF402 from Rhodococcus sp. RHA1

PDB ID 2p12

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools